Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01035
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILH9 Cluster: Putative uncharacterized protein; n=3; ...    34   3.4  
UniRef50_Q3MEC0 Cluster: Methyltransferase FkbM; n=2; Nostocacea...    33   7.8  

>UniRef50_Q8ILH9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2353

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = +2

Query: 113 H*ISCLLYRLHRIQLCLVIKLQCTYSQHNLVLHCTQVFNLCFKNVL----GLYQNYKNKR 280
           H I   +Y +H   L L I    T+  +++V  C + FNL F N+L    G+ +N KNK+
Sbjct: 478 HSIDTNVYIIHSYVL-LNISYFLTFFFNHMVF-CNRDFNL-FCNILNDKKGIQKNKKNKK 534

Query: 281 LTELFVEVKLSPFYACDIINLR 346
             ELF E      Y  DIINLR
Sbjct: 535 NEELFKE------YLNDIINLR 550


>UniRef50_Q3MEC0 Cluster: Methyltransferase FkbM; n=2;
           Nostocaceae|Rep: Methyltransferase FkbM - Anabaena
           variabilis (strain ATCC 29413 / PCC 7937)
          Length = 550

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -2

Query: 451 IWPSFNKLSFLLIKNKNEISHSLQSLVRTEKIYQKP*IYNITSIKRR*FHFHKQ 290
           +W   + L F   KN + +SHSL +L RT K ++   +  +++I +   H HK+
Sbjct: 424 VWDKDDVLKFYAPKNSDHVSHSLLNLQRTSKYFEAK-VKRLSTIMQE--HNHKK 474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,164,555
Number of Sequences: 1657284
Number of extensions: 11256699
Number of successful extensions: 23666
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23663
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)