Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01035
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 107 NRWQCIPKLEYDKD 66
           +R+QC P L YD++
Sbjct: 120 SRYQCSPGLAYDRE 133


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 107 NRWQCIPKLEYDKD 66
           +R+QC P L YD++
Sbjct: 120 SRYQCSPGLAYDRE 133


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 30  YCTILA*YFVHCILVVF*FRY 92
           YCT L     +C++V+F   Y
Sbjct: 247 YCTTLIGLIKNCVIVIFELYY 267


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 448  WPSFNKLSFLLIKNKNEI 395
            WP   K++F   ++KNEI
Sbjct: 1254 WPFDPKVNFTYFEDKNEI 1271


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 448  WPSFNKLSFLLIKNKNEI 395
            WP   K++F   ++KNEI
Sbjct: 1254 WPFDPKVNFTYFEDKNEI 1271


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 209 HCTQVFNLCFKNVLGLYQNYKNKRLTELF 295
           +C ++FNL  + V  LY+   N  +   F
Sbjct: 389 YCGKIFNLTTRQVRTLYKLPPNYEIRHKF 417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,743
Number of Sequences: 336
Number of extensions: 3470
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)