Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01035
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA...    29   5.5  
AY089609-1|AAL90347.1|  754|Drosophila melanogaster RE22432p pro...    29   7.2  
AL050231-6|CAB43325.1|  755|Drosophila melanogaster EG:BACR37P7....    29   7.2  
AE014298-15|AAF45492.5|  840|Drosophila melanogaster CG3114-PB, ...    29   7.2  

>AE014298-936|AAN09179.1|  213|Drosophila melanogaster CG32741-PA
           protein.
          Length = 213

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 132 CIVCIGFNYV**LSYNALIPNII*YFIALRYLI 230
           C+VC+  +Y     YNA I  I+ + I LRY I
Sbjct: 172 CVVCVYISY----EYNACIIKILYFMITLRYFI 200


>AY089609-1|AAL90347.1|  754|Drosophila melanogaster RE22432p
           protein.
          Length = 754

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 1   ICLDKLTVYTTVRFSHSTLCIVSLSYSNLGIHCHLLIA 114
           +CL  + V T++  S ST    S S  N G+ C+ LI+
Sbjct: 576 VCLAPMQVDTSINRSTSTAASSSSSLGNGGVQCYSLIS 613


>AL050231-6|CAB43325.1|  755|Drosophila melanogaster
           EG:BACR37P7.7,FBgn0005427;ewg protein.
          Length = 755

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 1   ICLDKLTVYTTVRFSHSTLCIVSLSYSNLGIHCHLLIA 114
           +CL  + V T++  S ST    S S  N G+ C+ LI+
Sbjct: 576 VCLAPMQVDTSINRSTSTAASSSSSLGNGGVQCYSLIS 613


>AE014298-15|AAF45492.5|  840|Drosophila melanogaster CG3114-PB,
           isoform B protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 1   ICLDKLTVYTTVRFSHSTLCIVSLSYSNLGIHCHLLIA 114
           +CL  + V T++  S ST    S S  N G+ C+ LI+
Sbjct: 662 VCLAPMQVDTSINRSTSTAASSSSSLGNGGVQCYSLIS 699


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,200,915
Number of Sequences: 53049
Number of extensions: 509123
Number of successful extensions: 889
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)