Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01031
(779 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 ty... 117 4e-25
UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n... 102 1e-20
UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG168... 101 2e-20
UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whol... 101 2e-20
UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocent... 97 4e-19
UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor (G... 95 1e-18
UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellu... 94 3e-18
UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whol... 92 1e-17
UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabd... 91 2e-17
UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen t... 89 2e-16
UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precurso... 89 2e-16
UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3; Endopterygota|... 89 2e-16
UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice ... 87 4e-16
UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Da... 87 4e-16
UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstat... 87 5e-16
UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n... 85 1e-15
UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;... 83 8e-15
UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor [C... 83 8e-15
UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4; Strongyl... 79 1e-13
UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46; Eumet... 77 4e-13
UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n... 77 5e-13
UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio "Co... 76 1e-12
UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium ... 69 1e-10
UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 69 2e-10
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ... 68 3e-10
UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Da... 68 3e-10
UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2; Platyhelminth... 66 7e-10
UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma j... 46 8e-04
UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella ve... 46 0.001
UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollage... 44 0.003
UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n... 44 0.003
UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whol... 43 0.010
UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.013
UniRef50_A6RGS9 Cluster: Predicted protein; n=1; Ajellomyces cap... 34 4.6
>UniRef50_UPI00015B49AB Cluster: PREDICTED: similar to alpha-5 type IV
collagen; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to alpha-5 type IV collagen - Nasonia vitripennis
Length = 1702
Score = 117 bits (281), Expect = 4e-25
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTDK 189
GQ L SPGSCL EFR RPFIEC G G CN+F+TAVSYW++TI D F+KP Q+TLKTD
Sbjct: 1524 GQPLSSPGSCLEEFRARPFIECRGQGTCNFFSTAVSYWMATIKDYEQFRKPQQQTLKTDH 1583
Query: 190 DSRVSRCTVCMRQWASQ 240
SRVSRC+VC+R+ S+
Sbjct: 1584 TSRVSRCSVCIRRRVSE 1600
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYF-ATAVSYWLSTINDNWMFQKPIQETLK 180
A Q L +PGSCL++F PF CN C+Y SYWLS+ M PI
Sbjct: 1411 AHAQDLGTPGSCLKKFSVMPFNVCNLNNVCDYANRNDYSYWLSSNEQMPMSMTPIP---S 1467
Query: 181 TDKDSRVSRCTVC 219
+ + +SRC+VC
Sbjct: 1468 REVGAYISRCSVC 1480
>UniRef50_P29400 Cluster: Collagen alpha-5(IV) chain precursor; n=61;
Eumetazoa|Rep: Collagen alpha-5(IV) chain precursor -
Homo sapiens (Human)
Length = 1685
Score = 102 bits (244), Expect = 1e-20
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ SGQ+L SPGSCL EFR+ PFIEC+G G CNY+A + S+WL+T++ + MF KP ETLK
Sbjct: 1608 EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLK 1667
Query: 181 T-DKDSRVSRCTVCMRQ 228
D +R+SRC VCM++
Sbjct: 1668 AGDLRTRISRCQVCMKR 1684
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L + GSCLR F T PF+ CN CN+ + SYWLST M +P++
Sbjct: 1498 AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMQPLK---G 1554
Query: 181 TDKDSRVSRCTVC 219
+SRC VC
Sbjct: 1555 QSIQPFISRCAVC 1567
>UniRef50_Q9VMV5 Cluster: CG16858-PA; n=6; Schizophora|Rep: CG16858-PA
- Drosophila melanogaster (Fruit fly)
Length = 1940
Score = 101 bits (243), Expect = 2e-20
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTDK 189
GQ+L+SPGSCL EFR +P IEC+G GRCNY+ S+WL+ I + F +P Q+TLK D
Sbjct: 1665 GQNLVSPGSCLEEFRAQPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKADF 1724
Query: 190 DSRVSRCTVCMRQWASQTYSTAR 258
S++SRCTVC R+ S TA+
Sbjct: 1725 TSKISRCTVCRRRGNSFVARTAK 1747
Score = 43.2 bits (97), Expect = 0.007
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L GSC+ F T P++ C+ C++ S WLST M PIQ
Sbjct: 1552 AVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQ---G 1608
Query: 181 TDKDSRVSRCTVC 219
D +SRC VC
Sbjct: 1609 RDLMKYISRCVVC 1621
>UniRef50_Q4SZ69 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 471
Score = 101 bits (242), Expect = 2e-20
Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ SGQ+L SPGSCL EFR+ PFIEC+G G CNY+ + S+WL+T+ + MF+KP ETLK
Sbjct: 394 EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQSETLK 453
Query: 181 T-DKDSRVSRCTVCMRQ 228
+ +RVSRC VCM++
Sbjct: 454 AGNLQTRVSRCVVCMKR 470
Score = 53.2 bits (122), Expect = 7e-06
Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQ-ETL 177
A GQ L + GSCLR F T PF+ CN CN+ + SYWLST M PI E++
Sbjct: 244 AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESI 303
Query: 178 KTDKDSRVSRCTVC 219
K +SRC VC
Sbjct: 304 K----PFISRCAVC 313
>UniRef50_Q07265 Cluster: 3 alpha procollagen; n=4; Strongylocentrotus
purpuratus|Rep: 3 alpha procollagen - Strongylocentrotus
purpuratus (Purple sea urchin)
Length = 1752
Score = 97.1 bits (231), Expect = 4e-19
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ SGQ L SPGSCL +FR+ PFIEC+G G+CNY+AT ++WLS+I N F P ETLK
Sbjct: 1675 EGSGQMLSSPGSCLEDFRSSPFIECHGDGKCNYYATTYTFWLSSITGNAQFTMPQSETLK 1734
Query: 181 TDK-DSRVSRCTVCMR 225
+RVSRC VC+R
Sbjct: 1735 AGSLRTRVSRCAVCLR 1750
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTD 186
GQ L PGSCL+ F T PF+ CN C+ + SYWLST M PI+
Sbjct: 1567 GQDLGKPGSCLKRFSTMPFLFCNINNVCHVASRNDYSYWLSTTEPMPMNMAPIR---GGQ 1623
Query: 187 KDSRVSRCTVC 219
+SRC VC
Sbjct: 1624 LQPFISRCVVC 1634
>UniRef50_Q01955 Cluster: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin]; n=61;
Eumetazoa|Rep: Collagen alpha-3(IV) chain precursor
(Goodpasture antigen) [Contains: Tumstatin] - Homo
sapiens (Human)
Length = 1670
Score = 95.5 bits (227), Expect = 1e-18
Identities = 38/77 (49%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ +GQ+L SPGSCL EFR PF+EC+G G CNY++ + S+WL+++N MF+KPI T+K
Sbjct: 1592 EGTGQALASPGSCLEEFRASPFLECHGRGTCNYYSNSYSFWLASLNPERMFRKPIPSTVK 1651
Query: 181 T-DKDSRVSRCTVCMRQ 228
+ + +SRC VCM++
Sbjct: 1652 AGELEKIISRCQVCMKK 1668
Score = 49.6 bits (113), Expect = 9e-05
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L + GSCL+ F T PF+ CN CN+ + SYWLST M PI
Sbjct: 1482 AHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAPITGRA- 1540
Query: 181 TDKDSRVSRCTVC 219
+ +SRCTVC
Sbjct: 1541 --LEPYISRCTVC 1551
>UniRef50_Q28084 Cluster: Collagen alpha-3(IV) chain; n=13; cellular
organisms|Rep: Collagen alpha-3(IV) chain - Bos taurus
(Bovine)
Length = 471
Score = 94.3 bits (224), Expect = 3e-18
Identities = 38/76 (50%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ +GQ+L SPGSCL EFR PFIEC+G G CNY++ + S+WL++++ MF+KPI T+K
Sbjct: 393 EGAGQALASPGSCLEEFRASPFIECHGRGTCNYYSNSYSFWLASLDPKRMFRKPIPSTVK 452
Query: 181 T-DKDSRVSRCTVCMR 225
+ ++ +SRC VCM+
Sbjct: 453 AGELENIISRCQVCMK 468
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L + GSCL+ F T PF+ CN CN+ + SYWLST M PI
Sbjct: 283 AHGQDLGTLGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPAMIPMDMAPITGRA- 341
Query: 181 TDKDSRVSRCTVC 219
+ +SRCTVC
Sbjct: 342 --LEPYISRCTVC 352
>UniRef50_Q4SZ73 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11805, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1026
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNW-MFQKPIQET 174
+ GQSL+SPGSCL +FR PFIECNG G C+YFA S+WL+T++ N F P QET
Sbjct: 949 EGGGQSLVSPGSCLEDFRATPFIECNGAKGTCHYFANKYSFWLTTVDPNQEFFYSPSQET 1008
Query: 175 LKTDKD-SRVSRCTVCMR 225
LK ++ S+VSRC VC +
Sbjct: 1009 LKGGQERSKVSRCQVCSK 1026
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L PGSCL F T PF+ C+ C Y + SYWLST P+ +
Sbjct: 841 AHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDKSYWLST-----TASIPMMPVAE 895
Query: 181 TDKDSRVSRCTVC 219
+ +SRC+VC
Sbjct: 896 AQIQAYISRCSVC 908
>UniRef50_P17139-2 Cluster: Isoform b of P17139 ; n=2; Caenorhabditis
elegans|Rep: Isoform b of P17139 - Caenorhabditis elegans
Length = 1502
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ +GQSL SPGSCL EFR PFIEC+G G CNY+AT +W S ++ + F+KP+ +TLK
Sbjct: 1425 EGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYATNHGFWPSIVDQDKQFRKPMSQTLK 1484
Query: 181 TD--KDSRVSRCTVCMR 225
KD RVSRC VC++
Sbjct: 1485 AGGLKD-RVSRCQVCLK 1500
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
ASGQ L PGSCL +F T PF+ CN C+ + S+WLST P+ T
Sbjct: 1315 ASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAI 1374
Query: 181 TDKDSRVSRCTVC 219
+SRC VC
Sbjct: 1375 R---PYISRCAVC 1384
>UniRef50_UPI0000DB7985 Cluster: PREDICTED: similar to Collagen type
IV CG4145-PA, isoform A isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Collagen type IV
CG4145-PA, isoform A isoform 1 - Apis mellifera
Length = 1913
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQSL S GSCL +FR PFIECNG G+C+Y+ +S+W++TI D FQ P Q+TLK
Sbjct: 1838 GQSLSSSGSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAG 1897
Query: 184 DKDSRVSRCTVCMR 225
+ S++SRC VC++
Sbjct: 1898 NLRSKISRCQVCIK 1911
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFATA-VSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+R+F T PF+ C+ C+Y SYWLST + M P+QE ++ + +SR
Sbjct: 1736 GSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMM--PVQE---SEIEQYISR 1790
Query: 208 CTVC 219
C VC
Sbjct: 1791 CVVC 1794
>UniRef50_Q9GQB1 Cluster: Type IV collagen alpha 1 chain precursor;
n=1; Hydra vulgaris|Rep: Type IV collagen alpha 1 chain
precursor - Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 1723
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +1
Query: 7 SGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTD 186
SGQ L S GSCL +FR P+IEC+G G C Y+ +S+WLSTI ++ MFQ P E L+ +
Sbjct: 1648 SGQLLSSSGSCLEDFRVNPYIECHGRGTCWYYGPTLSFWLSTIGESNMFQVPKFEILERN 1707
Query: 187 KDSRVSRCTVCMR 225
+RVSRC VCM+
Sbjct: 1708 LKARVSRCAVCMK 1720
Score = 47.2 bits (107), Expect = 5e-04
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQ-ETL 177
A GQ L PGSCL+ F T PF+ C+ +C + S+WLST +KP + +
Sbjct: 1538 AFGQDLGQPGSCLKRFSTMPFLFCDIQNKCVVASRNDYSFWLSTA------EKPKEAPSS 1591
Query: 178 KTDKDSRVSRCTVC 219
D ++ +SRC VC
Sbjct: 1592 GADLENYISRCIVC 1605
>UniRef50_Q7PVR6 Cluster: ENSANGP00000016652; n=3;
Endopterygota|Rep: ENSANGP00000016652 - Anopheles
gambiae str. PEST
Length = 461
Score = 88.6 bits (210), Expect = 2e-16
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTDK 189
GQ +SPGSC+ EFR +P IEC+G G CN++ S+WL+ I+D F +P +TLK +
Sbjct: 334 GQDFVSPGSCMEEFRPQPVIECHGHGTCNFYDGISSFWLTIIDDAMQFNRPQPQTLKAHQ 393
Query: 190 DSRVSRCTVCMRQ 228
S+VSRC VC R+
Sbjct: 394 TSKVSRCIVCRRK 406
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTD 186
GQ L + GSCLR F T PF+ C+ CNY + + WL+T M PI D
Sbjct: 223 GQDLGAAGSCLRRFSTMPFMFCDINNVCNYASNNDDTIWLATPEPMPMSMAPI----PAD 278
Query: 187 KDSR-VSRCTVC 219
+ R +SRC+VC
Sbjct: 279 QVERYISRCSVC 290
>UniRef50_UPI000065E566 Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Collagen alpha 3; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Collagen alpha 3 - Takifugu rubripes
Length = 1258
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
D S Q LISPGSCL FR PFIEC+G G CNY+ + S+W+++++ MF KPI +T+K
Sbjct: 1184 DGSSQPLISPGSCLETFRKVPFIECHGRGTCNYYPDSYSFWMASLDPKNMFGKPIPQTVK 1243
Query: 181 TDK-DSRVSRCTVCM 222
S +SRC VCM
Sbjct: 1244 EPSLQSILSRCRVCM 1258
Score = 46.4 bits (105), Expect = 8e-04
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTD 186
GQ L +PGSCL F T PF+ C+ C Y + SYWLST + +
Sbjct: 1076 GQDLGTPGSCLPHFSTMPFLVCDTESNCRYASRNDYSYWLST---GKALPENMVSITGDM 1132
Query: 187 KDSRVSRCTVC 219
S +SRC VC
Sbjct: 1133 LASYISRCAVC 1143
>UniRef50_Q58FS7 Cluster: Type IV collagen alpha 3 chain; n=2; Danio
rerio|Rep: Type IV collagen alpha 3 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 244
Score = 87.4 bits (207), Expect = 4e-16
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ SGQ L+SPGSCL +FR PFIEC+G G CN++ + SYWL++++ MF P ++T K
Sbjct: 164 EGSGQPLVSPGSCLEQFRKIPFIECHGRGTCNFYPDSYSYWLASLDHTNMFSMPNRQTAK 223
Query: 181 TDKDSRVSRCTVCMRQ 228
+ +SRC VCM+Q
Sbjct: 224 --QKEIISRCQVCMKQ 237
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTD 186
GQ L + GSCL F T PF+ CN C Y + SYWLST D M P Q+ + +
Sbjct: 56 GQDLGTLGSCLPMFNTMPFMVCNRDETCRYASRNDYSYWLST--DTPML--PDQQMMSGE 111
Query: 187 -KDSRVSRCTVC 219
+SRC+VC
Sbjct: 112 ILKWYISRCSVC 123
>UniRef50_UPI00006608B5 Cluster: Homolog of Homo sapiens "Tumstatin;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Tumstatin - Takifugu rubripes
Length = 1374
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ SGQ L SPGSCL +FR PFIEC+G G CNY+ + SYWL+ ++ + MF KP T
Sbjct: 1298 EGSGQPLASPGSCLEQFRKIPFIECHGRGTCNYYTDSYSYWLAALSPHDMFSKPKPHTDT 1357
Query: 181 TD-KDSRVSRCTVCMRQ 228
+ S +SRC VCM+Q
Sbjct: 1358 GEFPGSLISRCRVCMKQ 1374
Score = 47.6 bits (108), Expect = 3e-04
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L + GSCL F T PF+ CN C Y + SYWLST N + P+ +
Sbjct: 1188 AHGQDLGTLGSCLPRFTTMPFLFCNTDSTCRYASRNDYSYWLST-NQVVLSNMPL---IS 1243
Query: 181 TD-KDSRVSRCTVC 219
D S +SRC+VC
Sbjct: 1244 GDLLRSYISRCSVC 1257
>UniRef50_P08120 Cluster: Collagen alpha-1(IV) chain precursor; n=5;
Diptera|Rep: Collagen alpha-1(IV) chain precursor -
Drosophila melanogaster (Fruit fly)
Length = 1775
Score = 85.4 bits (202), Expect = 1e-15
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1699 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1758
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1759 ERQSHVSRCQVCMK 1772
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+ F T P + C CNY + ++WL+T N P+ + +SR
Sbjct: 1597 GSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVENIEIRQYISR 1651
Query: 208 CTVC 219
C VC
Sbjct: 1652 CVVC 1655
>UniRef50_UPI0000613E3C Cluster: Collagen alpha-2(IV) chain; n=2;
Bos taurus|Rep: Collagen alpha-2(IV) chain - Bos Taurus
Length = 227
Score = 83.0 bits (196), Expect = 8e-15
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETL 177
+ GQSL+SPGSCL +FR PFIECNG G C+Y+A S+WL+TI + P +TL
Sbjct: 149 EGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPEQSFQGTPSADTL 208
Query: 178 KTDK-DSRVSRCTVCMR 225
K + +SRC VCM+
Sbjct: 209 KAGLIRTHISRCQVCMK 225
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF+ CN C Y + SYWLST P+ +
Sbjct: 41 AHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLST-----TAPLPMMPVAE 95
Query: 181 TDKDSRVSRCTVC 219
D +SRC+VC
Sbjct: 96 EDIRPYISRCSVC 108
>UniRef50_P08572 Cluster: Collagen alpha-2(IV) chain precursor
[Contains: Canstatin]; n=48; Tetrapoda|Rep: Collagen
alpha-2(IV) chain precursor [Contains: Canstatin] - Homo
sapiens (Human)
Length = 1712
Score = 83.0 bits (196), Expect = 8e-15
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECN-GLGRCNYFATAVSYWLSTINDNWMFQKPIQETL 177
+ GQSL+SPGSCL +FR PFIECN G G C+Y+A S+WL+TI + P +TL
Sbjct: 1634 EGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPEQSFQGSPSADTL 1693
Query: 178 KTDK-DSRVSRCTVCMR 225
K + +SRC VCM+
Sbjct: 1694 KAGLIRTHISRCQVCMK 1710
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF+ CN C Y + SYWLST P+ +
Sbjct: 1526 AHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLST-----TAPLPMMPVAE 1580
Query: 181 TDKDSRVSRCTVC 219
+ +SRC+VC
Sbjct: 1581 DEIKPYISRCSVC 1593
>UniRef50_Q26640 Cluster: Alpha2(IV)-like collagen; n=4;
Strongylocentrotus purpuratus|Rep: Alpha2(IV)-like
collagen - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 1747
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ GQ L S GSCL FR PFIECNG G C++F+ S+WL+ I++ F P + T+K
Sbjct: 1670 EGGGQGLESVGSCLENFRATPFIECNGRGNCHFFSNEYSFWLTVIDEEDQFAIPRKRTIK 1729
Query: 181 TDK-DSRVSRCTVCMR 225
+ + S VSRC VC +
Sbjct: 1730 SGQLQSVVSRCRVCQK 1745
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL+ F T PF+ CN CNY + SYWL+T N+ P+ +
Sbjct: 1563 AHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTT-NE----PLPMMPLMN 1617
Query: 181 TDKDSRVSRCTVC 219
D +SRCTVC
Sbjct: 1618 QQIDPYISRCTVC 1630
>UniRef50_P55787 Cluster: Collagen alpha-4(IV) chain; n=46;
Eumetazoa|Rep: Collagen alpha-4(IV) chain - Oryctolagus
cuniculus (Rabbit)
Length = 623
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTI-NDNWMFQKPIQETLKT 183
GQ+L+SPGSCL +FR PF+EC G G C++FA S+WL+T+ D +F P +TLK
Sbjct: 546 GQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVPPDLQVFSAPSPDTLKE 605
Query: 184 DKDSR--VSRCTVCMR 225
+ R +SRC VC++
Sbjct: 606 SQAQRQKISRCQVCVK 621
Score = 36.3 bits (80), Expect = 0.86
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYF-ATAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF CN C+Y SYWL++ P+ +
Sbjct: 435 AHNQDLGLAGSCLPIFSTLPFAYCNIHQVCHYAQRNDKSYWLASAG-----PLPMMPLSE 489
Query: 181 TDKDSRVSRCTVC 219
+ +SRC VC
Sbjct: 490 EEIRPYISRCAVC 502
>UniRef50_P53420 Cluster: Collagen alpha-4(IV) chain precursor; n=36;
Euteleostomi|Rep: Collagen alpha-4(IV) chain precursor -
Homo sapiens (Human)
Length = 1690
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTINDNWMFQK-PIQETLKT 183
GQ+L+SPGSCL +FR PF+EC G G C++FA S+WL+T+ + F P +TLK
Sbjct: 1613 GQALMSPGSCLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVKADLQFSSAPAPDTLKE 1672
Query: 184 DKDSR--VSRCTVCMR 225
+ R +SRC VC++
Sbjct: 1673 SQAQRQKISRCQVCVK 1688
Score = 35.1 bits (77), Expect = 2.0
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYF-ATAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF CN C+Y SYWL++ M P+ E
Sbjct: 1502 AHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMM--PLSEEAI 1559
Query: 181 TDKDSRVSRCTVC 219
VSRC VC
Sbjct: 1560 R---PYVSRCAVC 1569
>UniRef50_UPI000065E567 Cluster: Homolog of Brachydanio rerio
"Collagen, type I, alpha 3.; n=1; Takifugu rubripes|Rep:
Homolog of Brachydanio rerio "Collagen, type I, alpha 3.
- Takifugu rubripes
Length = 1426
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTINDNWMFQKPIQETL 177
+ SGQ+L S GSCL+ F+T P IEC G G C+YF+ S+WL+TI+ F+ P T+
Sbjct: 1349 EGSGQALTSSGSCLKNFQTHPIIECQGPQGSCHYFSNLYSFWLTTISPTEQFKAPRPGTI 1408
Query: 178 KT-DKD-SRVSRCTVCMR 225
K D+ S+ S+C VC+R
Sbjct: 1409 KAPDRQRSKTSQCHVCLR 1426
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETL 177
+A Q L GSCLR F T PF CN C++ + SYWLST P+
Sbjct: 1241 NAHAQDLGQAGSCLRVFSTMPFSYCN-KAACHFSSRNDKSYWLST-----AAPIPMMPVF 1294
Query: 178 KTDKDSRVSRCTVC 219
+ S +SRC VC
Sbjct: 1295 GQEISSHISRCVVC 1308
>UniRef50_O09238 Cluster: Collagen type IV; n=2; Pseudocorticium
jarrei|Rep: Collagen type IV - Pseudocorticium jarrei
Length = 854
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLK 180
+ +GQ L SPGSCL+ FR+ PFI C G G+C+Y + + SYW+ ++ FQ T
Sbjct: 774 EGTGQGLESPGSCLQHFRSTPFIGCGGRGQCSYDSVSGSYWMIVLDALNPFQDTEPGTYP 833
Query: 181 -TDKDSRVSRCTVCMRQWASQ 240
+D + R+SRC VC +W +
Sbjct: 834 VSDIEKRLSRCRVC--EWVGR 852
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATA-VSYWLSTINDNWMFQKPIQETLKTD 186
GQ L PGSC+ F P + CN + RC + SYWLST +P +D
Sbjct: 668 GQDLGDPGSCMPSFHPMPVVRCNPMQRCEFARRKDESYWLST-----NATRPPIPVSGSD 722
Query: 187 KDSRVSRCTVC 219
+ +SRC+VC
Sbjct: 723 IEEHISRCSVC 733
>UniRef50_Q4S0I4 Cluster: Chromosome 2 SCAF14781, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 2 SCAF14781,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1468
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTIN 138
+ GQSL SPGSCL +FRT PFIECNG G C+YFA S+WLS+++
Sbjct: 1421 EGGGQSLSSPGSCLEDFRTTPFIECNGAKGTCHYFANKHSFWLSSVD 1467
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF+ CN C Y + SYWLST M P+++
Sbjct: 1313 AHNQDLGLAGSCLPRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMM--PVED--- 1367
Query: 181 TDKDSRVSRCTVC 219
+ +SRC+VC
Sbjct: 1368 VEIKPYISRCSVC 1380
>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; n=3;
Danio rerio|Rep: Type IV collagen alpha 4 chain - Danio
rerio
Length = 1639
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTINDNWMFQKPIQETL 177
+ GQSL S GSCL++FR++PF+EC G G C+YFA+ S+W+ TI+ P +
Sbjct: 1561 EGGGQSLTSTGSCLQDFRSQPFVECQGPRGTCSYFASIYSFWM-TIDMEHNDSSPHGPVI 1619
Query: 178 KTDKDSR--VSRCTVCM 222
++ R SRC++CM
Sbjct: 1620 TEERQQRDSTSRCSICM 1636
Score = 42.3 bits (95), Expect = 0.013
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF CN + C+Y + SYWLST + + KP++
Sbjct: 1454 AHTQDLGQAGSCLPVFSTMPFSCCN-MDTCDYASRNDKSYWLST--NAPIPNKPLK---G 1507
Query: 181 TDKDSRVSRCTVC 219
D + +SRC VC
Sbjct: 1508 QDIEEHISRCVVC 1520
>UniRef50_Q4TZW9 Cluster: Type IV collagen alpha 4 chain; n=3; Danio
rerio|Rep: Type IV collagen alpha 4 chain - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 240
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNG-LGRCNYFATAVSYWLSTINDNWMFQKPIQETL 177
+ GQSL S GSCL++FR++PF+EC G G C+YFA+ S+W+ TI+ P +
Sbjct: 159 EGGGQSLTSTGSCLQDFRSQPFVECQGPRGTCSYFASIYSFWM-TIDMEHNDSSPHGPVI 217
Query: 178 KTDKDSR--VSRCTVCM 222
++ R SRC++CM
Sbjct: 218 TEERQQRDSTSRCSICM 234
Score = 42.3 bits (95), Expect = 0.013
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PF CN + C+Y + SYWLST + + KP++
Sbjct: 52 AHTQDLGQAGSCLPVFSTMPFSCCN-MDTCDYASRNDKSYWLST--NAPIPNKPLK---G 105
Query: 181 TDKDSRVSRCTVC 219
D + +SRC VC
Sbjct: 106 QDIEEHISRCVVC 118
>UniRef50_Q5C3P1 Cluster: SJCHGC06113 protein; n=2;
Platyhelminthes|Rep: SJCHGC06113 protein - Schistosoma
japonicum (Blood fluke)
Length = 587
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIEC-NGLGRCNYFATAVSYWLSTINDN-WMFQKPIQETLKT 183
GQ L SPGSC+ FR P IEC N +G C+Y++ A Y+L +N N F+KP+ +K
Sbjct: 508 GQQLSSPGSCMEHFRYSPVIECNNNVGMCHYWSDAKVYYLRALNPNITQFEKPVGFVMKA 567
Query: 184 DKD---SRVSRCTVCMR 225
+ + VS+C VCM+
Sbjct: 568 AEGPVLNNVSKCRVCMK 584
>UniRef50_Q5BYE6 Cluster: SJCHGC08138 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08138 protein - Schistosoma
japonicum (Blood fluke)
Length = 206
Score = 46.4 bits (105), Expect = 8e-04
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 DASGQSLISPGSCLREFRTRPFIECNGL--GRCNY-FATAVSYWLSTINDNWMFQKPIQE 171
D++ L +PGSCLR+F PF C G C SYWLST+ + +M E
Sbjct: 129 DSTTMDLGTPGSCLRKFSIMPFANCFAKVNGNCQINMRNGRSYWLSTL-EQYMLSPARVE 187
Query: 172 TLKTDKDSRVSRCTVCM-RQW 231
+K +SRC VC R W
Sbjct: 188 NIK----PYISRCIVCQSRTW 204
>UniRef50_A7T3G2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 590
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWL---STINDNWMFQKPIQETLK 180
GQ L GSCL+ F T P++ CN G+CNY A+ Y L S I+ + K I+E
Sbjct: 514 GQDLGQAGSCLKRFTTMPYLYCNIFGKCNY-ASRNDYSLLDDSPIDHRNVKLKAIKERYS 572
Query: 181 TDKDSRVSRCTV 216
D+ +VS V
Sbjct: 573 EDRFMKVSEIKV 584
>UniRef50_UPI0000DA44CD Cluster: PREDICTED: similar to procollagen,
type IV, alpha 6; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to procollagen, type IV, alpha 6 - Rattus
norvegicus
Length = 1405
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/73 (42%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYF-ATAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PFI CN C+Y SYWLST M P+ E
Sbjct: 1285 AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMM--PVGE--- 1339
Query: 181 TDKDSRVSRCTVC 219
T +SRC+VC
Sbjct: 1340 TQIPQYISRCSVC 1352
>UniRef50_UPI0000DBF028 Cluster: UPI0000DBF028 related cluster; n=9;
Rattus norvegicus|Rep: UPI0000DBF028 UniRef100 entry -
Rattus norvegicus
Length = 1549
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/73 (42%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYF-ATAVSYWLSTINDNWMFQKPIQETLK 180
A Q L GSCL F T PFI CN C+Y SYWLST M P+ E
Sbjct: 1449 AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMM--PVGE--- 1503
Query: 181 TDKDSRVSRCTVC 219
T +SRC+VC
Sbjct: 1504 TQIPQYISRCSVC 1516
>UniRef50_Q4SB07 Cluster: Chromosome undetermined SCAF14677, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14677,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 856
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/44 (50%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLST 132
A GQ L + GSCL F T PF+ CN C Y + SYWLST
Sbjct: 772 AHGQDLGTLGSCLPRFTTMPFLFCNTDRTCRYASRNDYSYWLST 815
>UniRef50_A7T795 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 331
Score = 42.3 bits (95), Expect = 0.013
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNY 99
GQ L GSCL+ F T P++ CN G+CNY
Sbjct: 295 GQDLGQAGSCLKRFTTMPYLYCNIFGKCNY 324
>UniRef50_A6RGS9 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1469
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 213 GVHET-MGISDV*HRTRTGDVSFVPNAQRRPF--RGPSPTGRVPRWHRRGYRVASRKVP 380
G H+ +G++D H GDVS N ++RP GP R P RR A RK P
Sbjct: 1162 GRHQNHVGVND--HSAEQGDVSIANNKRKRPLDQSGPDMLNRAPSHMRRTAESAIRKKP 1218
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,177,182
Number of Sequences: 1657284
Number of extensions: 14661711
Number of successful extensions: 33708
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 32582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33677
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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