Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01031
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 101 8e-22
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 101 8e-22
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 85 8e-17
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 85 8e-17
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 85 8e-17
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 85 8e-17
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 85 8e-17
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 85 8e-17
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 85 8e-17
AY880250-1|AAX11177.1| 407|Drosophila melanogaster ligand-gated... 29 5.4
AY880249-1|AAX11176.1| 432|Drosophila melanogaster ligand-gated... 29 5.4
AE014296-2588|ABC66135.2| 762|Drosophila melanogaster CG33989-P... 29 5.4
AE014296-2587|AAF49571.3| 737|Drosophila melanogaster CG33989-P... 29 5.4
AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-P... 29 7.2
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 101 bits (243), Expect = 8e-22
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTDK 189
GQ+L+SPGSCL EFR +P IEC+G GRCNY+ S+WL+ I + F +P Q+TLK D
Sbjct: 1663 GQNLVSPGSCLEEFRAQPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKADF 1722
Query: 190 DSRVSRCTVCMRQWASQTYSTAR 258
S++SRCTVC R+ S TA+
Sbjct: 1723 TSKISRCTVCRRRGNSFVARTAK 1745
Score = 43.2 bits (97), Expect = 4e-04
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L GSC+ F T P++ C+ C++ S WLST M PIQ
Sbjct: 1550 AVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQ---G 1606
Query: 181 TDKDSRVSRCTVC 219
D +SRC VC
Sbjct: 1607 RDLMKYISRCVVC 1619
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 101 bits (243), Expect = 8e-22
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGLGRCNYFATAVSYWLSTINDNWMFQKPIQETLKTDK 189
GQ+L+SPGSCL EFR +P IEC+G GRCNY+ S+WL+ I + F +P Q+TLK D
Sbjct: 1665 GQNLVSPGSCLEEFRAQPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKADF 1724
Query: 190 DSRVSRCTVCMRQWASQTYSTAR 258
S++SRCTVC R+ S TA+
Sbjct: 1725 TSKISRCTVCRRRGNSFVARTAK 1747
Score = 43.2 bits (97), Expect = 4e-04
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A GQ L GSC+ F T P++ C+ C++ S WLST M PIQ
Sbjct: 1552 AVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQNNDDSLWLSTAEPMPMTMTPIQ---G 1608
Query: 181 TDKDSRVSRCTVC 219
D +SRC VC
Sbjct: 1609 RDLMKYISRCVVC 1621
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1699 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1758
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1759 ERQSHVSRCQVCMK 1772
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+ F T P + C CNY + ++WL+T N P+ + +SR
Sbjct: 1597 GSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVENIEIRQYISR 1651
Query: 208 CTVC 219
C VC
Sbjct: 1652 CVVC 1655
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 345 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETITSFWMYNLESSQPFERPQQQTIKAG 404
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 405 ERQSHVSRCQVCMK 418
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+ F T P + C CNY + ++WL+T N P+ + +SR
Sbjct: 243 GSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVENIEIRQYISR 297
Query: 208 CTVC 219
C VC
Sbjct: 298 CVVC 301
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1699 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1758
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1759 ERQSHVSRCQVCMK 1772
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+ F T P + C CNY + ++WL+T N P+ + +SR
Sbjct: 1597 GSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVENIEIRQYISR 1651
Query: 208 CTVC 219
C VC
Sbjct: 1652 CVVC 1655
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1699 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1758
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1759 ERQSHVSRCQVCMK 1772
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 31 GSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSR 207
GSC+ F T P + C CNY + ++WL+T N P+ + +SR
Sbjct: 1597 GSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVENIEIRQYISR 1651
Query: 208 CTVC 219
C VC
Sbjct: 1652 CVVC 1655
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1703 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1762
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1763 ERQSHVSRCQVCMK 1776
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L SPGSC+ F T P + C CNY + ++WL+T N P+
Sbjct: 1592 AHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVEN 1646
Query: 181 TDKDSRVSRCTVC 219
+ +SRC VC
Sbjct: 1647 IEIRQYISRCVVC 1659
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1703 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1762
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1763 ERQSHVSRCQVCMK 1776
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L SPGSC+ F T P + C CNY + ++WL+T N P+
Sbjct: 1592 AHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVEN 1646
Query: 181 TDKDSRVSRCTVC 219
+ +SRC VC
Sbjct: 1647 IEIRQYISRCVVC 1659
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 85.4 bits (202), Expect = 8e-17
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 GQSLISPGSCLREFRTRPFIECNGL-GRCNYFATAVSYWLSTINDNWMFQKPIQETLKT- 183
GQ+L SPGSCL +FR PFIECNG G C+++ T S+W+ + + F++P Q+T+K
Sbjct: 1703 GQALQSPGSCLEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAG 1762
Query: 184 DKDSRVSRCTVCMR 225
++ S VSRC VCM+
Sbjct: 1763 ERQSHVSRCQVCMK 1776
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ASGQSLISPGSCLREFRTRPFIECNGLGRCNYFA-TAVSYWLSTINDNWMFQKPIQETLK 180
A Q L SPGSC+ F T P + C CNY + ++WL+T N P+
Sbjct: 1592 AHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYASRNDKTFWLTT---NAAI--PMMPVEN 1646
Query: 181 TDKDSRVSRCTVC 219
+ +SRC VC
Sbjct: 1647 IEIRQYISRCVVC 1659
>AY880250-1|AAX11177.1| 407|Drosophila melanogaster ligand-gated
ion channel pHCl-C protein.
Length = 407
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 182 VFNVSCMGFWN-IQLSFIVDSQYETAVAK*LQRPRPLHSMNGRVLNSRKHEPGEMR 18
V N++ M W+ + + FI S E + R RPLH++ R + +PGE R
Sbjct: 271 VSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQPGEKR 326
>AY880249-1|AAX11176.1| 432|Drosophila melanogaster ligand-gated
ion channel pHCl-B protein.
Length = 432
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 182 VFNVSCMGFWN-IQLSFIVDSQYETAVAK*LQRPRPLHSMNGRVLNSRKHEPGEMR 18
V N++ M W+ + + FI S E + R RPLH++ R + +PGE R
Sbjct: 296 VSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQPGEKR 351
>AE014296-2588|ABC66135.2| 762|Drosophila melanogaster CG33989-PE,
isoform E protein.
Length = 762
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 182 VFNVSCMGFWN-IQLSFIVDSQYETAVAK*LQRPRPLHSMNGRVLNSRKHEPGEMR 18
V N++ M W+ + + FI S E + R RPLH++ R + +PGE R
Sbjct: 626 VSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQPGEKR 681
>AE014296-2587|AAF49571.3| 737|Drosophila melanogaster CG33989-PD,
isoform D protein.
Length = 737
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 182 VFNVSCMGFWN-IQLSFIVDSQYETAVAK*LQRPRPLHSMNGRVLNSRKHEPGEMR 18
V N++ M W+ + + FI S E + R RPLH++ R + +PGE R
Sbjct: 601 VSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQPGEKR 656
>AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-PA
protein.
Length = 1506
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 252 RTRTGDVSFVPNAQRRPFRGPSPTGRVPRWHRRGYRVASRK 374
R G+ + NAQ + SP R W R G+R SR+
Sbjct: 164 RGGNGNPFLIGNAQTEEMQSKSPKRRRFHWERHGHRCPSRR 204
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,542,418
Number of Sequences: 53049
Number of extensions: 671827
Number of successful extensions: 1232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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