Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01031
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    27   0.26 
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    27   0.26 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    24   1.4  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    22   5.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.7  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 77  LHSMNGRVLNSRKHEPGEMRLCPD 6
           LH M+G  LN  K E G   L PD
Sbjct: 63  LHFMDGNTLNVEKLESGTRELTPD 86


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 77  LHSMNGRVLNSRKHEPGEMRLCPD 6
           LH M+G  LN  K E G   L PD
Sbjct: 63  LHFMDGNTLNVEKLESGTRELTPD 86


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 443 M*NNVLIYL*HNTSVLLIPIEILPFKLNM*NFIMLF 550
           M N +++Y+  +T  L  P  +    L + NF+M+F
Sbjct: 68  MGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMF 103


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 443 M*NNVLIYL*HNTSVLLIPIEILPFKLNM*NFIMLF 550
           M N +++Y+  +T  L  P  +    L + +F+M+F
Sbjct: 34  MGNGMVVYIFLSTKSLRTPSNLFVINLAISDFLMMF 69


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 374 FPRGDTITSAVPPWYSACRAWPTER 300
           F  GD    A     +ACR WPT R
Sbjct: 187 FKEGDRFLQAA----NACRFWPTGR 207


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 444 MKYEKNN*IYSISKIVN 394
           + + KNN I  ISK+VN
Sbjct: 507 INFSKNNTIVDISKLVN 523


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 292 WALGTKLTSPVLVRCY 245
           W L   +TSP L+ C+
Sbjct: 164 WVLAGAITSPPLLGCF 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,859
Number of Sequences: 438
Number of extensions: 5464
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)