Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01030
         (331 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   116   5e-27
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   106   4e-24
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.20 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.26 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   1.4  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    27   3.2  
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr...    26   5.5  
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend...    26   5.5  
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo...    26   5.5  
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor...    26   5.5  
Z29443-9|CAA82575.2|  292|Caenorhabditis elegans Hypothetical pr...    26   7.3  
L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical pr...    26   7.3  
L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AB019521-1|BAC66463.1|  292|Caenorhabditis elegans T-box transcr...    26   7.3  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  116 bits (278), Expect = 5e-27
 Identities = 48/87 (55%), Positives = 61/87 (70%)
 Frame = +1

Query: 16  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 195
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 196 XXXMRHLKIVRRRFRNGFKEGNQRRPR 276
               RHL+ V  RFRNGF+EG   +PR
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  106 bits (254), Expect = 4e-24
 Identities = 46/87 (52%), Positives = 59/87 (67%)
 Frame = +1

Query: 16  MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 195
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 196 XXXMRHLKIVRRRFRNGFKEGNQRRPR 276
               RHL+ V  RFRNGF+ G   +PR
Sbjct: 61  TGRTRHLRDVNARFRNGFR-GTTPKPR 86


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 34  SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 141
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 34  SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 141
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 47  AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 154
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -1

Query: 127 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPS 20
           H G +++F  +++++  F I+   +F  +  L+Y S
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYES 112


>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
           protein F52B5.1 protein.
          Length = 1119

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LAACVI*RLSGGASVMVLKRETNAAQEGCSFVMNQYVLS 313
           L AC++  +    + +++ R+ N  ++GC + ++  VLS
Sbjct: 744 LLACILIFMDQQITTVIVNRKENKLKKGCGYHLDLLVLS 782


>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
           chloride bicarbonateanion exchanger alternative variant
           a protein.
          Length = 1161

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LAACVI*RLSGGASVMVLKRETNAAQEGCSFVMNQYVLS 313
           L AC++  +    + +++ R+ N  ++GC + ++  VLS
Sbjct: 786 LLACILIFMDQQITTVIVNRKENKLKKGCGYHLDLLVLS 824


>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
           transporter ABTS-1 protein.
          Length = 1119

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LAACVI*RLSGGASVMVLKRETNAAQEGCSFVMNQYVLS 313
           L AC++  +    + +++ R+ N  ++GC + ++  VLS
Sbjct: 744 LLACILIFMDQQITTVIVNRKENKLKKGCGYHLDLLVLS 782


>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
           protein.
          Length = 1119

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +2

Query: 197 LAACVI*RLSGGASVMVLKRETNAAQEGCSFVMNQYVLS 313
           L AC++  +    + +++ R+ N  ++GC + ++  VLS
Sbjct: 744 LLACILIFMDQQITTVIVNRKENKLKKGCGYHLDLLVLS 782


>Z29443-9|CAA82575.2|  292|Caenorhabditis elegans Hypothetical
           protein T07C4.6 protein.
          Length = 292

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 214 LKIVRRRFRNGFKEGNQRRPRR 279
           LKI    F  GF++GN  R RR
Sbjct: 181 LKIKHNSFAKGFRDGNLSRKRR 202


>L23646-5|ABD94102.1|  145|Caenorhabditis elegans Hypothetical
           protein F44E2.6b protein.
          Length = 145

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 4   KSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 138
           +S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 37  ESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81


>L23646-4|AAA28039.1|  152|Caenorhabditis elegans Hypothetical
           protein F44E2.6 protein.
          Length = 152

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 4   KSDKMTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 138
           +S   T  T  F     K   +C  CG   ++      A CG+PA
Sbjct: 44  ESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88


>AB019521-1|BAC66463.1|  292|Caenorhabditis elegans T-box
           transcription factor TBX-9 protein.
          Length = 292

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 214 LKIVRRRFRNGFKEGNQRRPRR 279
           LKI    F  GF++GN  R RR
Sbjct: 181 LKIKHNSFAKGFRDGNLSRKRR 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,435,205
Number of Sequences: 27780
Number of extensions: 138494
Number of successful extensions: 320
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)