Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01029
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   6.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/31 (29%), Positives = 21/31 (67%)
 Frame = -2

Query: 553 LQNLLIVKFVVKAR*YCSCLCNVFFLLLIWV 461
           L+++LI K   + + + +C   +FF++L+W+
Sbjct: 118 LKHMLIWKSYKRTQIFITC--ELFFVILLWI 146


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 377 YKFEGLKYTYNGC 339
           Y F+G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 438 TRQAVSSSTHISNKKNT 488
           TR++ SSSTH S+++ +
Sbjct: 384 TRKSTSSSTHTSSQQTS 400


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 296 IGGVVIPTFDIGHKSTIAKL*VVP*NRTCL 207
           + G  +P F +G ++ IAK  +VP  +T +
Sbjct: 410 VPGTYMP-FGVGPRNCIAKFDIVPNGKTVI 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,101
Number of Sequences: 336
Number of extensions: 3760
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)