Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01029
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846...    29   4.0  
08_02_1186 + 25027498-25029854,25029953-25030564,25031742-250318...    29   5.3  
05_04_0436 + 21226656-21226695,21226819-21226934,21227059-212272...    29   5.3  
02_01_0124 + 901034-901153,901455-901481,901713-901792,903739-90...    29   5.3  
05_03_0175 + 9222749-9222819,9223045-9223116,9223426-9223497,922...    28   7.0  
06_03_0275 - 19079782-19081262,19081803-19082029,19085080-19085099     28   9.3  

>05_04_0443 -
           21283680-21283940,21284044-21284118,21284620-21284649,
           21286744-21287247
          Length = 289

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -1

Query: 149 VNFFRSIM*LVTLVGYCMF*LSIG--VCSTTNLFLISIV 39
           +NFF+S+    +L+GYC+F L +G  +C   +  L+ I+
Sbjct: 207 INFFQSL----SLLGYCLFPLDVGALICMLKDNVLLKII 241


>08_02_1186 +
           25027498-25029854,25029953-25030564,25031742-25031847,
           25032669-25033199
          Length = 1201

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 230 QLRALLL*ICDQYRK*VSPPRLFLP*SSNAFRFEGWGS 343
           QL+ L+L  CD     V P RL  P S  +F F+G+GS
Sbjct: 506 QLKVLILDGCDALEDVVVPNRL--PSSLRSFSFDGYGS 541


>05_04_0436 +
           21226656-21226695,21226819-21226934,21227059-21227210,
           21227309-21227394,21227999-21228126,21228267-21228317,
           21228574-21228660,21229418-21229487,21230334-21230470,
           21230855-21230932,21231912-21231998
          Length = 343

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 303 REAVMRFGLKGGAAVVSILKTFEFISQD 386
           +E  MRF L G A ++S+   F+F+S+D
Sbjct: 57  KEHAMRFPLVGSAMLLSLFLLFKFLSKD 84


>02_01_0124 +
           901034-901153,901455-901481,901713-901792,903739-903811,
           904015-904072,904561-904615,905140-905164,905361-905421,
           907416-907531,907661-907812,907918-908003,908182-908309,
           908451-908501,908774-908860,908964-909033,909351-909407,
           909729-909865,910313-910390,910971-911057
          Length = 515

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 303 REAVMRFGLKGGAAVVSILKTFEFISQD 386
           +E  MRF L G A ++S+   F+F+S+D
Sbjct: 210 KEHAMRFPLVGSAMLLSLFLLFKFLSKD 237


>05_03_0175 +
           9222749-9222819,9223045-9223116,9223426-9223497,
           9223609-9223680,9223765-9223836,9224408-9224482,
           9224587-9224658,9224912-9224977,9225051-9225095,
           9225220-9225724,9225807-9226005,9226080-9226238,
           9226316-9226434,9226556-9226766,9226905-9227136,
           9227219-9227369,9227458-9227781
          Length = 838

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 529 FVVKAR*YCSCLCNVFFLL-LIWVDELTACLVLSGYWSP 416
           F+V  R Y + + N F  + L W  + T C+  +GY+ P
Sbjct: 393 FIVVHRSYTATVSNNFLEIHLFWAGKGTCCIPTNGYYGP 431


>06_03_0275 - 19079782-19081262,19081803-19082029,19085080-19085099
          Length = 575

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 508 INGLLPRILLSINFASSAI 564
           ING LPRIL S NF + A+
Sbjct: 199 INGFLPRILASYNFDAEAL 217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,138,457
Number of Sequences: 37544
Number of extensions: 358616
Number of successful extensions: 625
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)