Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01027
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023269-1|AAY55685.1|  257|Drosophila melanogaster IP02648p pro...    73   5e-13
AF025408-1|AAC02944.1|  257|Drosophila melanogaster Windbeutel p...    73   5e-13
AE013599-2842|AAF57590.1|  257|Drosophila melanogaster CG7225-PA...    73   5e-13

>BT023269-1|AAY55685.1|  257|Drosophila melanogaster IP02648p
           protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 27  LRNFLVPVVFLAVLS--ASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHD 200
           + + LV ++ +A+ S   + A T TG V+LDE+SF K + +F  S+VKFD+A+PYG+KH+
Sbjct: 1   MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFDIAYPYGEKHE 60

Query: 201 AFVALAKDS-KDVDELLIA 254
           AF A +K + K   +LLIA
Sbjct: 61  AFTAFSKSAHKATKDLLIA 79



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +2

Query: 257 VGVKDYGEKDNEVLAEKYGATKDNFPVVRLFLKGKNDPIPFDDSQGFTTDELRRFVRENT 436
           VGVKDYGE +N+ L ++Y     NFP + LF    ++ +        T D L+ FV  NT
Sbjct: 81  VGVKDYGELENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANT 140

Query: 437 GLYLSLPGCVRSLDKL 484
            LY+   GC++  +++
Sbjct: 141 PLYIGRDGCIKEFNEV 156


>AF025408-1|AAC02944.1|  257|Drosophila melanogaster Windbeutel
           protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 27  LRNFLVPVVFLAVLS--ASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHD 200
           + + LV ++ +A+ S   + A T TG V+LDE+SF K + +F  S+VKFD+A+PYG+KH+
Sbjct: 1   MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFDIAYPYGEKHE 60

Query: 201 AFVALAKDS-KDVDELLIA 254
           AF A +K + K   +LLIA
Sbjct: 61  AFTAFSKSAHKATKDLLIA 79



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +2

Query: 257 VGVKDYGEKDNEVLAEKYGATKDNFPVVRLFLKGKNDPIPFDDSQGFTTDELRRFVRENT 436
           VGVKDYGE +N+ L ++Y     NFP + LF    ++ +        T D L+ FV  NT
Sbjct: 81  VGVKDYGELENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANT 140

Query: 437 GLYLSLPGCVRSLDKL 484
            LY+   GC++  +++
Sbjct: 141 PLYIGRDGCIKEFNEV 156


>AE013599-2842|AAF57590.1|  257|Drosophila melanogaster CG7225-PA
           protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 27  LRNFLVPVVFLAVLS--ASLANTSTGSVELDEISFNKVINKFEASLVKFDVAFPYGDKHD 200
           + + LV ++ +A+ S   + A T TG V+LDE+SF K + +F  S+VKFD+A+PYG+KH+
Sbjct: 1   MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFDIAYPYGEKHE 60

Query: 201 AFVALAKDS-KDVDELLIA 254
           AF A +K + K   +LLIA
Sbjct: 61  AFTAFSKSAHKATKDLLIA 79



 Score = 61.7 bits (143), Expect = 9e-10
 Identities = 27/76 (35%), Positives = 42/76 (55%)
 Frame = +2

Query: 257 VGVKDYGEKDNEVLAEKYGATKDNFPVVRLFLKGKNDPIPFDDSQGFTTDELRRFVRENT 436
           VGVKDYGE +N+ L ++Y     NFP + LF    ++ +        T D L+ FV  NT
Sbjct: 81  VGVKDYGELENKALGDRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANT 140

Query: 437 GLYLSLPGCVRSLDKL 484
            LY+   GC++  +++
Sbjct: 141 PLYIGRDGCIKEFNEV 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,518,626
Number of Sequences: 53049
Number of extensions: 442375
Number of successful extensions: 1326
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)