Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01025
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical p... 128 2e-30
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 6.4
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 6.4
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 6.4
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 26 8.5
>Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical
protein Y57G11C.16 protein.
Length = 154
Score = 128 bits (308), Expect = 2e-30
Identities = 57/87 (65%), Positives = 72/87 (82%)
Frame = +1
Query: 1 VGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKY 180
VGRR++ + +KAD+D++KRAGE TEE+ +KI+TIM NP QYKIP+WFLNRQKDI DGK
Sbjct: 36 VGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKT 95
Query: 181 SQLTSSNLDSKLREDLERLKKIRAQEG 261
QL S+ +D+KLREDLER+KKIR G
Sbjct: 96 GQLLSTAVDNKLREDLERMKKIRLHRG 122
Score = 39.1 bits (87), Expect = 0.001
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 255 RGMRHYWGLRVRGQH 299
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 268 ITGAFVCVVSTLRLLAGEEELLVYQRRS 351
+TGA + + +TL LLA LL QR S
Sbjct: 154 VTGALLSITNTLHLLASGYHLLKRQRNS 181
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 112 NPRQYKIPDWFLNRQKDIVDGKYS-QLTSSNLDSKLREDL 228
NP YK+ D++ N+ +++ K + +L S++L K +++L
Sbjct: 40 NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 25 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 204
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 205 DSKLREDLERLKKIR 249
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 25 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 204
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 205 DSKLREDLERLKKIR 249
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 25 VLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNL 204
VLK+ I L KR + E+E K +T+ K G + T + L
Sbjct: 45 VLKREQIALQKRMQQLNEDEERKKVTLAKQHEVSSRIAAITKSPKSFAFGSSTPRTLAYL 104
Query: 205 DSKLREDLERLKKIR 249
D+ + + + KK+R
Sbjct: 105 DNLPKSEQQYDKKLR 119
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 154 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAQEGCDITGAFVCVVSTLRLLAGEE 324
QKD + + L+ +LR+ ++ LK + +EG DITG ++ + +L G++
Sbjct: 50 QKDQEKCDRLKARKAELEMRLRQKMQELKDVCVEEG-DITGEMPVEINDV-VLPGDD 104
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 154 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAQEGCDITGAFVCVVSTLRLLAGEE 324
QKD + + L+ +LR+ ++ LK + +EG DITG ++ + +L G++
Sbjct: 118 QKDQEKCDRLKARKAELEMRLRQKMQELKDVCVEEG-DITGEMPVEINDV-VLPGDD 172
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical protein
R06C7.8 protein.
Length = 987
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 163 IVDGKYSQLTSSNL-DSKLREDLERLKKIRAQEGC-DITGAFVCVVS 297
+V GKY+QLT +++ D L D++R +R + C D+ F+ + S
Sbjct: 898 VVAGKYAQLTGASVGDYSLNVDIKRRNILR--DACYDVINRFLNIPS 942
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 154 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAQEGCDITGAFVCVVSTLRLLAGEE 324
QKD + + L+ +LR+ ++ LK + +EG DITG ++ + +L G++
Sbjct: 50 QKDQEKCDRLKARKAELEMRLRQKMQELKDVCVEEG-DITGEMPVEINDV-VLPGDD 104
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 154 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAQEGCDITGAFVCVVSTLRLLAGEE 324
QKD + + L+ +LR+ ++ LK + +EG DITG ++ + +L G++
Sbjct: 118 QKDQEKCDRLKARKAELEMRLRQKMQELKDVCVEEG-DITGEMPVEINDV-VLPGDD 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,735,907
Number of Sequences: 27780
Number of extensions: 139642
Number of successful extensions: 456
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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