Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01024
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.22
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 26 0.29
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 26 0.29
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 26 0.29
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.68
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.68
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.68
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.3
AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding prote... 21 8.3
AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-bind... 21 8.3
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 26.6 bits (56), Expect = 0.22
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Frame = +3
Query: 51 KSFNNHEIP---ALVTDSVSSILNS---SKNTKQKCVVPETSNVEQQTSLINSITVKDFL 212
K+ N+H + ++V +V++ +N+ S + VP TS TS INSITV+ +
Sbjct: 817 KNINDHCVTTEQSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTS-INSITVEKDV 875
Query: 213 KNELAKKITFTNKTTK 260
N++ +IT TN K
Sbjct: 876 INDVKTQIT-TNTPAK 890
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 26.2 bits (55), Expect = 0.29
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 428 IGMSSTCKLVQGLMYVLGCFHSECCPS 348
+G+ C L LMYV+ F +CCPS
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFCPDCCPS 359
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 26.2 bits (55), Expect = 0.29
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 428 IGMSSTCKLVQGLMYVLGCFHSECCPS 348
+G+ C L LMYV+ F +CCPS
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFCPDCCPS 359
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 26.2 bits (55), Expect = 0.29
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 428 IGMSSTCKLVQGLMYVLGCFHSECCPS 348
+G+ C L LMYV+ F +CCPS
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFCPDCCPS 359
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 394
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 462
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.68
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 326 DNTREQPSMDSIPSGNNRARTSTPVQVYKSMTYQSSSTSNLSNGL 460
D+ R + S + PSG R+ TP+ + T + +S S +G+
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGM 462
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 605 NCCITYLFSVS 637
NCC+ ++FS S
Sbjct: 75 NCCVIWIFSTS 85
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 272 EFVSLFDTKIPEGMKHDSDNTREQPSMDSIPSGNNRARTST-PVQV 406
E +S T I K+D R+ PS+ S+ + + +T T P++V
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKV 250
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 272 EFVSLFDTKIPEGMKHDSDNTREQPSMDSIPSGNNRARTST-PVQV 406
E +S T I K+D R+ PS+ S+ + + +T T P++V
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKV 250
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 272 EFVSLFDTKIPEGMKHDSDNTREQPSMDSIPSGNNRARTST-PVQV 406
E +S T I K+D R+ PS+ S+ + + +T T P++V
Sbjct: 256 ESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKV 301
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 272 EFVSLFDTKIPEGMKHDSDNTREQPSMDSIPSGNNRARTST-PVQV 406
E +S T I K+D R+ PS+ S+ + + +T T P++V
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTITCPIKV 250
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 605 NCCITYLFSVS 637
NCC+ ++FS S
Sbjct: 75 NCCVIWIFSTS 85
>AF393493-1|AAL60418.1| 142|Apis mellifera odorant binding protein
ASP2 protein.
Length = 142
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 467 NADDLSSVKGTSN 505
NADD+ VKG +N
Sbjct: 101 NADDIQLVKGIAN 113
>AF166497-1|AAD51945.1| 142|Apis mellifera putative odorant-binding
protein ASP2 protein.
Length = 142
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 467 NADDLSSVKGTSN 505
NADD+ VKG +N
Sbjct: 101 NADDIQLVKGIAN 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,880
Number of Sequences: 438
Number of extensions: 3474
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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