Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01018
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 381 QCLYFIITLEFLLKVKQHFLG*F*TQ 304
           +CL F +++ F+L VK+  +  F TQ
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQ 331


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 381 QCLYFIITLEFLLKVKQHFLG*F*TQ 304
           +CL F +++ F+L VK+  +  F TQ
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQ 331


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 381 QCLYFIITLEFLLKVKQHFLG*F*TQ 304
           +CL F +++ F+L VK+  +  F TQ
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQ 331


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 381 QCLYFIITLEFLLKVKQHFLG*F*TQ 304
           +CL F +++ F+L VK+  +  F TQ
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFFFTQ 331


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 644 GLPQGSVLSPL 612
           G+PQG VL+PL
Sbjct: 446 GIPQGVVLNPL 456


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 644 GLPQGSVLSPL 612
           G+PQG VL+PL
Sbjct: 446 GIPQGVVLNPL 456


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 502 MSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVF 368
           +   VTYS+K    +  N   S   P  ++  ++   L PSV  +
Sbjct: 119 LKKVVTYSVKTGHPYFVNQLFSAVDPYGLVAQWATDALNPSVYTY 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,041
Number of Sequences: 336
Number of extensions: 3591
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)