Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01018
(714 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 40 8e-05
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 39 2e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 39 2e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 38 2e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 37 5e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 36 0.001
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 35 0.002
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 35 0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 33 0.007
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 33 0.007
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 33 0.012
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 32 0.016
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 32 0.016
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 31 0.027
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 31 0.036
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 30 0.063
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.44
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 39.9 bits (89), Expect = 8e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 284
W N L++ + K V FSR R P + + F + V ++ A LGV+LDS L H
Sbjct: 802 WCKRNGLTICIEKCYCVSFSRCRSPVTGTYFMDGTAVNRQNHAKDLGVLLDSSLNFKQH 860
Score = 38.7 bits (86), Expect = 2e-04
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 209 HPFSLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALR 78
+P +K +YN ++RS+L+Y + P A ++ +++ IQ K R
Sbjct: 884 NPMCIKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAIQRKLTR 927
Score = 27.9 bits (59), Expect = 0.33
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -2
Query: 686 VISEDSYQSR--IVWKGLPQGSVLSPLLYNIYSHDLEASL 573
++ D + S+ + G+PQGS + PLL+ ++ +D+ +L
Sbjct: 726 IVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDVTLAL 765
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 38.7 bits (86), Expect = 2e-04
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -2
Query: 713 NLLSGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNIYSHDL 585
N GR L +++ SR V G+PQGSVL P L+N+ DL
Sbjct: 597 NYFVGRTLHYDTDEKVVSRTVSAGVPQGSVLGPTLWNVMYDDL 639
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 38.7 bits (86), Expect = 2e-04
Identities = 19/85 (22%), Positives = 41/85 (48%)
Frame = -3
Query: 508 DNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEAT 329
DN+ ++ + W+ + L L+ K+ +V+ S + P ++V ++ V
Sbjct: 672 DNVKAAAEEAIISVMEWMARHHLELAPAKTEMVVISSTKAPTRITVRVGDVDVTSSRSIR 731
Query: 328 FLGVILDSRLTGSPHCYYISDKCEK 254
+LGV L +L+ PH ++++ K
Sbjct: 732 YLGVTLQDKLSWLPHVKEVTERAGK 756
Score = 28.3 bits (60), Expect = 0.25
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 659 RIVWKGLPQGSVLSPLLYN-IYSHDLEASL 573
R V G+PQGS+L P L+N +Y L+ +L
Sbjct: 620 RSVTAGVPQGSILGPTLWNTMYDGVLDIAL 649
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 38.3 bits (85), Expect = 2e-04
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHC 281
W+ + L L+ K+ VL S + PP V+ ++ V +LGV L L H
Sbjct: 748 WMQQHGLELAPAKTEAVLISSKKTPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHV 807
Query: 280 YYISDKCEK 254
+S+K +
Sbjct: 808 TKVSEKASR 816
Score = 28.7 bits (61), Expect = 0.19
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 659 RIVWKGLPQGSVLSPLLYNI 600
R V G+PQGS+L P L+NI
Sbjct: 680 RHVTAGVPQGSILGPTLWNI 699
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 37.1 bits (82), Expect = 5e-04
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -3
Query: 469 LKVWLDNNSLSLSVPKSIIVLFSRMRLPPS-VSVFYNNIRVPVKSEATFLGVILDSRLTG 293
+K WL + L L+ K+ + + S ++ PP V + + + VP +LGV + + L+
Sbjct: 760 VKQWLLEHRLELAHSKTEMTVISSLKQPPEEVFITFGGVNVPFSRSIKYLGVRVHAHLSW 819
Query: 292 SPHCYYISDKCEK 254
PH I+ K +
Sbjct: 820 VPHVKEITLKATR 832
Score = 29.1 bits (62), Expect = 0.14
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 701 GRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
GR L + + R + G+PQGS+L P L+N+
Sbjct: 681 GRKLLFDTSEGPVERHISAGVPQGSILGPTLWNM 714
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.9 bits (79), Expect = 0.001
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPS-VSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 284
W+ + L L+ K+ + + S ++ PPS +S+ VP LGV++ L+ PH
Sbjct: 707 WMQQHHLELAPAKTEMTIISSLKHPPSHISIDVRGTAVPYSRSIKHLGVLVHDHLSWIPH 766
Query: 283 CYYISDK 263
++ +
Sbjct: 767 VTAVTQR 773
Score = 28.7 bits (61), Expect = 0.19
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 659 RIVWKGLPQGSVLSPLLYNI 600
R V G+PQGS+L P L+N+
Sbjct: 639 RCVSAGVPQGSILGPTLWNV 658
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 35.1 bits (77), Expect = 0.002
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHC 281
W+ + L ++ K+ VL S + P V++ ++ V +LGV L L+ PH
Sbjct: 755 WMAQHHLQIAPEKTECVLISSTKNPTQVTIRVGDVEVTSSRTMRYLGVTLHDHLSWLPHV 814
Query: 280 YYISDKCEK 254
++ + K
Sbjct: 815 REVTTRARK 823
Score = 29.9 bits (64), Expect = 0.083
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 698 RMLKVISEDSYQSRIVWKGLPQGSVLSPLLYN-IYSHDLEASL 573
R L + D +R + G+PQGS+L P L+N +Y L+ +L
Sbjct: 674 RELVFETSDGPVTRSITAGVPQGSILGPTLWNTMYDGVLDVAL 716
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.002
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -2
Query: 713 NLLSGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNIYSHDL 585
N R+L + + + R+V G+PQGSVL P L+N+ +++
Sbjct: 586 NYFRNRVLLYETNEGNRERVVTAGVPQGSVLGPTLWNLMYNEV 628
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.5 bits (73), Expect = 0.007
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLP-PSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 284
W+ + LSL+ K+ +++ S R ++ V + V K +LGV+L L+ PH
Sbjct: 697 WMVQHKLSLAPEKTELLMISSKRSGYRNIPVNICGVEVRSKRSIRYLGVMLHDHLSWRPH 756
Query: 283 CYYISDK 263
++DK
Sbjct: 757 VEMVADK 763
Score = 27.5 bits (58), Expect = 0.44
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 698 RMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
R L+ + D +R V G+ QGS+L P L+NI
Sbjct: 616 RELEYDTADGPVTRRVSAGVTQGSILGPTLWNI 648
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 33.5 bits (73), Expect = 0.007
Identities = 17/85 (20%), Positives = 41/85 (48%)
Frame = -3
Query: 508 DNMSDTVTYSLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEAT 329
D++ V+ ++++ W+ +N L ++ K+ ++ S + ++ + V
Sbjct: 651 DDIEILVSSQIRIIDRWMTDNGLKIAPTKTEFIMVSSHQRIQHGAIRVGDHVVHSSRTLK 710
Query: 328 FLGVILDSRLTGSPHCYYISDKCEK 254
+LG++LD RL + H Y ++ K
Sbjct: 711 YLGMVLDDRLEYTSHIRYAVERATK 735
Score = 29.1 bits (62), Expect = 0.14
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 698 RMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
R+L + D V G+PQGSVL P L+N+
Sbjct: 586 RVLMYDTTDGPAEIAVTSGVPQGSVLGPTLWNL 618
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 32.7 bits (71), Expect = 0.012
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPS-VSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 284
WL + L L+ K+ + + S ++ PP +++ VP +LGV L L+ PH
Sbjct: 702 WLREHHLELAHAKTEMTVISSLQQPPEDITITVGGTEVPFSRTLKYLGVRLHYNLSWVPH 761
Query: 283 CYYISDK 263
+ K
Sbjct: 762 VKAVIQK 768
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 659 RIVWKGLPQGSVLSPLLYNI 600
R + G+PQ S+L P L+N+
Sbjct: 634 RHISAGVPQESILGPTLWNV 653
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 32.3 bits (70), Expect = 0.016
Identities = 22/94 (23%), Positives = 41/94 (43%)
Frame = -3
Query: 481 SLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSR 302
S+ ++ W+ L ++ K+ ++ S + S S+ + R+ +LGVI+D R
Sbjct: 656 SVSRIESWMQQMRLEIAHKKTEFLIISSHKTVQSGSIRVGDERIESIRHLKYLGVIIDDR 715
Query: 301 LTGSPHCYYISDKCEKF*IYCVASLEFGGEPTLS 200
L+ H Y + K I + + G P S
Sbjct: 716 LSFRKHVEYACNNVFKAAISLIQIMPNIGGPKSS 749
Score = 27.1 bits (57), Expect = 0.58
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 644 GLPQGSVLSPLLYNI 600
G+PQGS+L P L+N+
Sbjct: 600 GVPQGSILGPTLWNV 614
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 32.3 bits (70), Expect = 0.016
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 713 NLLSGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
N L GR+L+ + + ++ + G+PQGSVL L+N+
Sbjct: 638 NYLDGRVLQYDTAEGVKTNAIPAGVPQGSVLGLTLWNV 675
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.5 bits (68), Expect = 0.027
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 707 LSGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI-YSHDLEASL 573
++ R L ++D +R + G+PQGS+L P L+N+ Y L+ L
Sbjct: 624 MTDRQLVFDTDDGPVTRNLSTGVPQGSILGPTLWNVMYDSVLDVQL 669
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 31.1 bits (67), Expect = 0.036
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -2
Query: 707 LSGRMLKVISEDSYQSRIVW--KGLPQGSVLSPLLYNIYSHDL 585
LS R +V SY S + G+PQG VLSPLL++++ +D+
Sbjct: 649 LSNRSCRV-KTGSYLSEEFFCTSGVPQGCVLSPLLFSLFINDV 690
Score = 30.3 bits (65), Expect = 0.063
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -3
Query: 460 WLDNNSLSLSVPKSIIVLFSRMRLPPSVSVFYNNIRVPVKSEATFLGVILDSRL 299
W +N L L K ++ FS P S + +N + LG+ILDSRL
Sbjct: 731 WCSSNLLRLCPDKCSVISFSHSLSPISFNYTLSNSSLSRVLSIRDLGIILDSRL 784
Score = 27.5 bits (58), Expect = 0.44
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 197 LKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRI 75
L+ LY AL+R +L+Y + I P +++ IQ R+
Sbjct: 817 LRNLYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRV 857
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 30.3 bits (65), Expect = 0.063
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 704 SGRMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
+ R L + D +R V G+PQGS+L P L+NI
Sbjct: 611 ANRELVYDTADGPVTRRVTAGVPQGSILGPTLWNI 645
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 27.5 bits (58), Expect = 0.44
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 698 RMLKVISEDSYQSRIVWKGLPQGSVLSPLLYNI 600
R L + D +R V G PQGS+L P L+N+
Sbjct: 611 RELTYDTTDGPVTRRVSAGCPQGSMLGPRLWNV 643
Score = 26.2 bits (55), Expect = 1.0
Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 481 SLKLLKVWLDNNSLSLSVPKSIIVLFSRMRLP-PSVSVFYNNIRVPVKSEATFLGVILDS 305
+++ + W+ ++ L L+ K+ V+ S +R P + + + + K +LGV++
Sbjct: 685 AVERVHAWMRHH-LQLAPEKTECVMISSLRRGHPEIPIRVGGLEIRSKQAIRYLGVMIHD 743
Query: 304 RLTGSPHCYYISDKCEK 254
PH +K +
Sbjct: 744 HFLWRPHVTMAVEKANR 760
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,160
Number of Sequences: 2352
Number of extensions: 15148
Number of successful extensions: 65
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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