Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01016
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053325-1|AAH53325.1|  702|Homo sapiens chromosome 14 open read...    31   3.4  
AK023213-1|BAB14466.1|  702|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AK001673-1|BAA91826.1|  702|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AK092895-1|BAC03998.1|  167|Homo sapiens idase mRNA.  protein.         31   6.0  

>BC053325-1|AAH53325.1|  702|Homo sapiens chromosome 14 open reading
           frame 115 protein.
          Length = 702

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 162 WKTR-RLFARKPTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGPQ 25
           W+ R R  AR+  ++   P  R+R R    +PS FW+W + A   P+
Sbjct: 507 WQRRLRRAARRQVLSGHLPFCRFRLRYPSLSPSAFWVWKSLARGWPR 553


>AK023213-1|BAB14466.1|  702|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13151 fis, clone NT2RP3003377. ).
          Length = 702

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 162 WKTR-RLFARKPTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGPQ 25
           W+ R R  AR+  ++   P  R+R R    +PS FW+W + A   P+
Sbjct: 507 WQRRLRRAARRQVLSGHLPFCRFRLRYPSLSPSAFWVWKSLARGWPR 553


>AK001673-1|BAA91826.1|  702|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10811 fis, clone NT2RP4000955. ).
          Length = 702

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 162 WKTR-RLFARKPTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGPQ 25
           W+ R R  AR+  ++   P  R+R R    +PS FW+W + A   P+
Sbjct: 507 WQRRLRRAARRQVLSGHLPFCRFRLRYPSLSPSAFWVWKSLARGWPR 553


>AK092895-1|BAC03998.1|  167|Homo sapiens idase mRNA.  protein.
          Length = 167

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 132 PTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGPQV 22
           P +  S  APR     W   P +  +WPA  AAGPQ+
Sbjct: 103 PRLRPSHTAPRPLTAGWAGVPGEA-LWPARLAAGPQL 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,444,015
Number of Sequences: 237096
Number of extensions: 2049170
Number of successful extensions: 3504
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3504
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)