Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01013
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    33   0.20 
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass...    29   4.3  
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass...    29   4.3  
Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    28   7.5  
AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = -1

Query: 341 FESFVKEHNREYKDDADRELHYQSFKKN 258
           FE F K++NR+YKD+++ +  + +F K+
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKS 70



 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 219 TTFGINKFADYTPEEQQSRLGLRLPAKKT 133
           T FGINKF+D +  E   RL   +P+  T
Sbjct: 88  TQFGINKFSDLSTAEFHGRLSNVVPSNNT 116


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 341 FESFVKEHNREYKDDADRELHYQSF 267
           FE F+ ++ R YKD+ +++  +Q F
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQF 71


>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 308, isoform e protein.
          Length = 2702

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 282 ALSIIQEK-LAEINQLNEKNPYTTFGINKFADYTPEEQQ 169
           A  I++E+ L+ +++  E    TTFG+ K     PE+++
Sbjct: 286 ASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 324


>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 308, isoform c protein.
          Length = 7548

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 282  ALSIIQEK-LAEINQLNEKNPYTTFGINKFADYTPEEQQ 169
            A  I++E+ L+ +++  E    TTFG+ K     PE+++
Sbjct: 5132 ASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 5170


>Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical
           protein F33A8.7 protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = -1

Query: 443 NFVSVAL-LIATVVMASSA-DTDPPRHYDLNQ 354
           N+V V L L+ATVV+++ A DTD     DLNQ
Sbjct: 7   NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -1

Query: 371 HYDLNQAKELFES-FVKEHNREYKDDADRELHYQ 273
           HYD+ QA   FES  + + N++++D   +E + Q
Sbjct: 192 HYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 341 FESFVKEHNREYKDDADRELHYQSFKKN 258
           F  F K+ +R YK +A+ +L  Q+F K+
Sbjct: 44  FVEFKKKFSRTYKSEAENQLRLQNFVKS 71


>AF016423-8|AAB65319.1|  409|Caenorhabditis elegans Hypothetical
           protein F40A3.7 protein.
          Length = 409

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = +2

Query: 200 LLMPNVV--YGFFSFNWF 247
           LL PN++  Y FF+FNW+
Sbjct: 75  LLFPNILANYSFFTFNWY 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,605,393
Number of Sequences: 27780
Number of extensions: 273517
Number of successful extensions: 653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)