Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01012
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 125 5e-29
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 125 5e-29
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 122 2e-28
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 120 1e-27
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 120 2e-27
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 120 2e-27
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 83 5e-19
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 83 2e-16
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 32 0.44
11_08_0071 + 28153043-28153555 31 1.0
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503... 29 5.4
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 29 5.4
03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228 29 5.4
04_04_1147 + 31261435-31261763,31261915-31262736,31262934-312629... 28 7.2
04_03_0238 - 13193508-13193946,13194010-13194062 28 9.5
02_05_0552 - 29911280-29912541,29912633-29912762 28 9.5
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 125 bits (301), Expect = 5e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNS
Sbjct: 135 YYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNS 194
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PD+AC LAKQAFD+AI+ELDTL+E
Sbjct: 195 PDRACNLAKQAFDEAISELDTLSE 218
Score = 118 bits (283), Expect = 7e-27
Identities = 56/86 (65%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDV 429
ERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +
Sbjct: 48 ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGI 107
Query: 430 LGLLDKHLIPKASNPESKVFYLKMKG 507
L LL+ HL+P ++ PESKVFYLKMKG
Sbjct: 108 LKLLESHLVPSSTAPESKVFYLKMKG 133
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 125 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 235
S+ + +EE V AKLAEQAERY++M M++V +T
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKT 38
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 125 bits (301), Expect = 5e-29
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAE TG R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNS
Sbjct: 353 YYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNS 412
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PD+AC LAKQAFD+AI+ELDTL+E
Sbjct: 413 PDRACNLAKQAFDEAISELDTLSE 436
Score = 120 bits (289), Expect = 1e-27
Identities = 58/86 (67%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDV 429
ERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +
Sbjct: 266 ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGI 325
Query: 430 LGLLDKHLIPKASNPESKVFYLKMKG 507
L LLD HL+P ++ PESKVFYLKMKG
Sbjct: 326 LKLLDSHLVPSSTAPESKVFYLKMKG 351
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 125 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 235
S + +EE V AKLAEQAERY++M M++V +T
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKT 256
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 122 bits (295), Expect = 2e-28
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
Y+RYLAE TG R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNS
Sbjct: 129 YHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNS 188
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PDKAC LAKQAFD+AI+ELDTL E
Sbjct: 189 PDKACNLAKQAFDEAISELDTLGE 212
Score = 116 bits (280), Expect = 2e-26
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDV 429
ERNLLSVAYKNV+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC +
Sbjct: 42 ERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGI 101
Query: 430 LGLLDKHLIPKASNPESKVFYLKMKG 507
L LLD HL+P ++ ESKVFYLKMKG
Sbjct: 102 LKLLDSHLVPSSTAAESKVFYLKMKG 127
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 140 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET 235
+ +EE V AKLAEQAERY++M M++V +T
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKT 32
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 120 bits (289), Expect = 1e-27
Identities = 55/84 (65%), Positives = 67/84 (79%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
Y+RYLAE +G+ R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNS
Sbjct: 112 YHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNS 171
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PD+AC LAKQAFD+AI+ELD+L E
Sbjct: 172 PDRACNLAKQAFDEAISELDSLGE 195
Score = 114 bits (274), Expect = 8e-26
Identities = 59/98 (60%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = +1
Query: 220 GSDGNRRRT*QRERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVK 393
G+ G T + ERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K
Sbjct: 14 GASGGEELTVE-ERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGK 72
Query: 394 VEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKG 507
+E EL IC +L LLD HL+P A ESKVFYLKMKG
Sbjct: 73 IEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKG 110
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 120 bits (288), Expect = 2e-27
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
Y+RYLAE TG R + + AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEILNS
Sbjct: 139 YHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNS 198
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PD+AC LAKQAFD+AI+ELDTL E
Sbjct: 199 PDRACTLAKQAFDEAISELDTLGE 222
Score = 107 bits (256), Expect = 1e-23
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDV 429
ERNLLSVAYKNV+GARR+SWR++SSIEQK E G+ A+ YR +VE EL IC +
Sbjct: 52 ERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGI 111
Query: 430 LGLLDKHLIPKASNPESKVFYLKMKG 507
L LLD+ L+P A+ ++KVFYLKMKG
Sbjct: 112 LRLLDERLVPAAAAVDAKVFYLKMKG 137
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 146 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNGRGT 265
+EE+V AKLAEQAERY++M M++V G T
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELT 49
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 120 bits (288), Expect = 2e-27
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
Y+RYLAE +G R E++ AY+ A +I+ A + THPIRLGLALNFSVFYYEILNS
Sbjct: 134 YHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNS 193
Query: 690 PDKACQLAKQAFDDAIAELDTLNE 761
PD+AC LAKQAFDDAIAELDTL E
Sbjct: 194 PDRACNLAKQAFDDAIAELDTLGE 217
Score = 115 bits (277), Expect = 4e-26
Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDV 429
ERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +
Sbjct: 47 ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGI 106
Query: 430 LGLLDKHLIPKASNPESKVFYLKMKG 507
L LLD HL+P A+ ESKVFYLKMKG
Sbjct: 107 LKLLDSHLVPSATAAESKVFYLKMKG 132
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 128 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 235
S +EE V AKLAEQAERY++M M++V +T
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKT 37
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 83.0 bits (196), Expect(2) = 5e-19
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +3
Query: 591 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNE 761
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSE 202
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Frame = +1
Query: 250 QRERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMAKEYRVKVEKELREICY 423
+ ERNLLSV YKN++GA+R++ R+I SIE ++T+G E + EYR KVE E+ +IC
Sbjct: 17 KEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICC 76
Query: 424 DVLGLLDK 447
DV+ ++DK
Sbjct: 77 DVINIIDK 84
Score = 29.5 bits (63), Expect(2) = 5e-19
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQ 587
YYRYLAE TG + V E S AY+
Sbjct: 88 YYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLG 435
ER L SV +K +GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL
Sbjct: 41 ERLLFSVGFKKTIGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLS 100
Query: 436 LLDKHLIPKASNPESKVFYLKMKG 507
++ H +P A++ E+ VF+ KMKG
Sbjct: 101 IIAIHCLPLANSGENVVFFYKMKG 124
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAE +TG + + + S AYQ A+ ++ FS+ EI+NS
Sbjct: 126 YYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL---------------FSLL--EIMNS 167
Query: 690 PDKACQLAKQAFDDAIAELDT 752
P++A Q+AKQA D+A AE+++
Sbjct: 168 PERASQVAKQALDEATAEINS 188
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +2
Query: 143 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 250
++E++V+ AKLAEQAERYDDM MK + V++S
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMS 38
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +1
Query: 403 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKGVTTGTLQ 528
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG T G ++
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKGSTNGIVK 117
>11_08_0071 + 28153043-28153555
Length = 170
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 130 GRWKRTNSLMPLSEGEKCI*TSKFKHNISFSLALNDILVLT 8
G W R N+ PL + + H++S S++L +ILV T
Sbjct: 130 GTWLRANTSCPLCRADTTPSSGDLHHHLSISVSLEEILVRT 170
>12_01_0611 -
5034481-5034709,5034863-5035020,5035231-5035475,
5036686-5036983,5037644-5038482,5039763-5039823
Length = 609
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +1
Query: 199 RHGGRDEGSDGNRRRT*QRERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK 378
R D GS +RR+ ++ +N + K+V ++I E+K K ++ K
Sbjct: 519 RQSDVDSGSTEDRRQRKEKIQNFIDCQVKDVEEFEAERDKLIKLHEEK------KVKLKK 572
Query: 379 EYRVKVEKELREICYDVLGLLDKH 450
EY K + +E+ + L+DKH
Sbjct: 573 EYLAKEFELEKELDTALTSLMDKH 596
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 400 KELREICYDVLGLLDK---HLIPKASNPESKVFYLKMKGVTTGTLQK 531
+E+RE+ YD+ LD+ H++ ++NP+ F +K + + T T+ +
Sbjct: 202 REVRELSYDIEDSLDEFMLHVVDGSANPDG--FIVKCRNLLTKTMAR 246
>03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228
Length = 628
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 143 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNGRGTSFQLLIRMS 292
D ++++ A+L EQA D A +++EV + GT FQL S
Sbjct: 140 DMKDVLLHARLVEQAAGEDQPAVSIEEVPGSNGRGGANEGTVFQLTFACS 189
>04_04_1147 +
31261435-31261763,31261915-31262736,31262934-31262970,
31262987-31263028,31263092-31263179,31264344-31264486
Length = 486
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 258 LPLLSSTPVSVTSFIAAAMSSYRSACSAN-LARCTSSSLSTDIVDDGRGLI 109
LP+L + + ++A M+S SA SAN A C + S S +++ G++
Sbjct: 415 LPMLDCEALPMAPYLAIQMASPLSAASANQFANCPTRSASNLKLEEQIGIV 465
>04_03_0238 - 13193508-13193946,13194010-13194062
Length = 163
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 199 RHGGRDEGSDGNRRRT*QRERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAK 378
RHGGR G NRRR+ + +V + V +RRS R EGS + + +
Sbjct: 37 RHGGRGVGFADNRRRSEALQTKEATVEF---VASRRSGQRAAPVGRGGYEGSAGRGRASG 93
Query: 379 EYRVKVEKELREICYDVLG 435
+ + C ++ G
Sbjct: 94 RGGAEASVSFAQPCSEIRG 112
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 71 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 217
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,431,001
Number of Sequences: 37544
Number of extensions: 457711
Number of successful extensions: 1491
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -