Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01008
(328 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 132 2e-30
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 122 1e-27
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 118 3e-26
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 105 2e-22
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 103 8e-22
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 98 4e-20
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 90 8e-18
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 90 8e-18
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 72 2e-12
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 69 3e-11
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 67 8e-11
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 66 2e-10
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 64 8e-10
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 63 1e-09
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 59 2e-08
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 58 3e-08
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 57 9e-08
UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa... 44 7e-04
UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169, w... 44 9e-04
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 43 0.002
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 42 0.003
UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 41 0.005
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 34 0.70
UniRef50_A2FHE6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Re... 32 2.8
UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5; ... 32 2.8
UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4; ... 32 2.8
UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora cras... 32 2.8
UniRef50_Q4EBT3 Cluster: Ankyrin repeat domain protein; n=4; Wol... 31 3.7
UniRef50_Q54KK9 Cluster: Putative uncharacterized protein; n=2; ... 31 3.7
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 31 4.9
UniRef50_Q8I5J4 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q57YE9 Cluster: Putative uncharacterized protein; n=6; ... 31 4.9
UniRef50_Q55BV7 Cluster: Myb domain-containing protein; n=1; Dic... 31 4.9
UniRef50_Q3V2G4 Cluster: Adult male small intestine cDNA, RIKEN ... 31 6.5
UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borreli... 31 6.5
UniRef50_A5FP19 Cluster: Septum formation initiator; n=2; Flavob... 31 6.5
UniRef50_A0EFV2 Cluster: Chromosome undetermined scaffold_94, wh... 31 6.5
UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4; Peziz... 31 6.5
UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Se... 30 8.6
UniRef50_Q22CC6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 132 bits (318), Expect = 2e-30
Identities = 62/68 (91%), Positives = 67/68 (98%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MPREIKDIKDFL+KARRKDAKSVKIKKN +NVKFKVRCSRFLYTLVITDKEKAEKLKQSL
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 244 PPGLKLKK 267
PPGL++K+
Sbjct: 61 PPGLQVKE 68
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 122 bits (295), Expect = 1e-27
Identities = 57/68 (83%), Positives = 65/68 (95%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MPR+I++IKDFL+ ARRKDAKSVKIKKN +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 244 PPGLKLKK 267
PPGL +K+
Sbjct: 61 PPGLAVKE 68
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 118 bits (283), Expect = 3e-26
Identities = 52/68 (76%), Positives = 63/68 (92%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MP+EIK+IKDFL+KARRKDAKSVKIKKN N KFKVRC+ +LYTLV+ DK+KAEKLKQSL
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 244 PPGLKLKK 267
PPG+++K+
Sbjct: 61 PPGIQVKE 68
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 105 bits (251), Expect = 2e-22
Identities = 49/58 (84%), Positives = 55/58 (94%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 237
+PREI++IKDFL+ A+RKDAKSVKIKKN +NVKFKVRCSR LYTLVITDKEKAEKLKQ
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ 74
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 103 bits (247), Expect = 8e-22
Identities = 46/67 (68%), Positives = 60/67 (89%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MP++I +IKDFL+ ARRKDA+SVKIK++ + VKFKVRCSR+LYTL + D+EKA+KLKQSL
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 244 PPGLKLK 264
PPGL ++
Sbjct: 61 PPGLSVQ 67
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 97.9 bits (233), Expect = 4e-20
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +1
Query: 112 RKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLKLKK 267
RKDAKSVKIKKN +NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL +K+
Sbjct: 366 RKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKE 417
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 90.2 bits (214), Expect = 8e-18
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MPREIK +K+FL RKDA+ VK+K NP KFKVRCSR+LYTLV+ DK+KA+K+++S+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 244 PPGLK 258
P +K
Sbjct: 61 HPSVK 65
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 90.2 bits (214), Expect = 8e-18
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPEN--VKFKVRCSRFLYTLVITDKEKAEKLKQ 237
MP E+ DIK F+ RRKDA S +IK+N + +KFKVRC RFLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 238 SLPPGLKL 261
SLPP LK+
Sbjct: 61 SLPPSLKI 68
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 72.1 bits (169), Expect = 2e-12
Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNP---------ENVKFKVRCSRFLYTLVITDKE 216
M REIKDIK+F+ ARR D KS +K N + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 217 KAEKLKQSLPPGLKLK 264
KA+KL+QSLPP L++K
Sbjct: 61 KAKKLQQSLPPTLEIK 76
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 68.5 bits (160), Expect = 3e-11
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +1
Query: 76 IKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 255
+ IKDFL R D +SV +K + + KFK+RC R LYTL + D+ KA+K+ QSLP +
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSI 77
Query: 256 KLKK 267
K+ K
Sbjct: 78 KIIK 81
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 66.9 bits (156), Expect = 8e-11
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 243
MP+++++ K L + ++V++K N EN KFKVRC+++LYT + DK KAE+LK+++
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 244 P 246
P
Sbjct: 61 P 61
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 65.7 bits (153), Expect = 2e-10
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPE-----NVKFKVRCSRFLYTLVITDKEKAEK 228
MP+E+KD+KD+L +R DAKSV + K + KFKVRCSR+LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 229 LKQSLPPGLKLK 264
++ ++P L+ K
Sbjct: 61 VEATIPSNLEKK 72
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 63.7 bits (148), Expect = 8e-10
Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 216
M REI DIK FL RR D K+ +K N + KFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 217 KAEKLKQSLPPGLKLKK 267
KA+KL QSLPP LK+ +
Sbjct: 61 KAKKLIQSLPPTLKVNR 77
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 63.3 bits (147), Expect = 1e-09
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 216
M +EI DIK+FL RR+D S +K N + KFK+R SR+LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 217 KAEKLKQSLPPGLKLKK 267
KA+KL QSLPP + K
Sbjct: 61 KAKKLLQSLPPTFNVNK 77
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 52 FVFNMPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEK 228
F +MP+++ K+FL A R DAK VK+KK + EN KFK+R +++LYTL + K E
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTVKPK-FVEL 79
Query: 229 LKQSLPPGLKL 261
++ S+P L++
Sbjct: 80 VQNSIPESLEV 90
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 58.4 bits (135), Expect = 3e-08
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSV-------KIKKNPENVKFKVRCSRFLYTLVITDKEKA 222
MP++I DI+ FL +R+ D +V K KKN K K+R ++LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 223 EKLKQSLPPGLK 258
E+++ SL P LK
Sbjct: 61 ERIENSLLPSLK 72
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 56.8 bits (131), Expect = 9e-08
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 240
MP+++ K+FL A R DAK VK+KK N + KFK+R ++FLYTLV+ K E ++ S
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK-FVELVQNS 59
Query: 241 LPPGLKL 261
+P L++
Sbjct: 60 IPESLEV 66
>UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0546700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 44.0 bits (99), Expect = 7e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 63 HAA*NQRYQRLFN*GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 221
HA + R Q L GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 16 HAEADPRDQGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 68
>UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 177
Score = 43.6 bits (98), Expect = 9e-04
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Frame = +1
Query: 64 MPREIKDIKDFLI-----KARRKDA-----KSVKIKKNPENVKFKVRCSRFLYTLVITDK 213
MP+EI+D+K+FL +A+ KDA K++ IK++ + KFK+R ++L+T DK
Sbjct: 1 MPKEIQDVKEFLSLMKGSEAQGKDANKEPKKNLYIKESKKITKFKLRGKKYLFTFKTADK 60
Query: 214 EKAEKLKQSLP 246
KA + + P
Sbjct: 61 NKASRNSINTP 71
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 240
MP+++ + F+ + DAK+V I + N E KFK++ ++ LYTL + E +++ S
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQVIDS 60
Query: 241 LP 246
LP
Sbjct: 61 LP 62
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = +3
Query: 105 GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 221
GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 15 GEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 89
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +1
Query: 64 MPREIKDIKDFL-IKARRKDA-------KSVKIKKNPENVKFKVRCSRFLYTLVITDKEK 219
MP+EI DIK F+ + KD K V +K N KFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLRGKKYLYTFKTADPKI 60
Query: 220 AEKLKQSLP 246
A+ +K ++P
Sbjct: 61 AKGIKDAIP 69
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +1
Query: 64 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 237
MP E+K +F+ R A ++K+ + VK K R R+LYTL + +++AE L+Q
Sbjct: 1 MPVELKSFDEFVKVVER--AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 161 SSRFDAQGSCTPWSSLTKRRLRNLSR 238
SSR DA +CTP S+T RRLR+ SR
Sbjct: 114 SSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_A2FHE6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1382
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 52 FVFNMPREI-KDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEK 228
FV N +EI ++I + + ++D + K KN K + L+ ++ +KE +++
Sbjct: 1135 FVMNNSKEIIQEITKLIKENNKEDDEQTKFSKNYLETNTKPIINEILHQIITENKENSQQ 1194
Query: 229 LKQSLPPGLKLKK 267
K +P +K+KK
Sbjct: 1195 -KPEIPKEVKIKK 1206
>UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Rep:
Pol-like protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1148
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = +1
Query: 58 FNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 234
F+ EIK++K ++ ++++ V ++ + ++ +C+R+ + +IT K+K
Sbjct: 335 FDFNNEIKEVKKEMLVLAEENSRGVILRAKEKKIEENEKCTRYFFKKIITKGGGISKIK 393
>UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 232)
Length = 524
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 49 LFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRF 186
+F FN + IKDI+D + + R K + V + P N KF S F
Sbjct: 335 IFYFNYAKFIKDIEDLINRVRAKGQEFVNSIELPANEKFDNFVSNF 380
>UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 445
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 154 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLKL 261
N+++ V C R YTL D E++K+ L LKL
Sbjct: 51 NIEYSVLCQRLKYTLSSLDYSSPEQIKEQLIDALKL 86
>UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1007
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 101 LRRGGKTPNRSK*RRTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQVS 256
L+ G +TP RS + + RMS SR DA+ + SS++ S+ + S
Sbjct: 280 LKEGDQTPERSDSKSSNRMSRSRSDARSKLSKVSSVSSEATETQSQTFTSQS 331
>UniRef50_Q4EBT3 Cluster: Ankyrin repeat domain protein; n=4;
Wolbachia|Rep: Ankyrin repeat domain protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 1094
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 10 VKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFL 189
+KSVY + LF+F+ RE KDI FL + D K + + K++ R +
Sbjct: 452 IKSVYRYFKDVKSLFIFDNAREYKDISKFLPLSLYPDYKKPYVLITSRDNKWEARGDIEV 511
Query: 190 YTLVITDKEKA 222
L I +K +A
Sbjct: 512 IKLDIFNKTEA 522
>UniRef50_Q54KK9 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Dictyostelium discoideum AX4
Length = 1472
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 97 LIKARRKDAKSVKIK-KNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLKLK 264
L+K + K+ K K+K KN EN+ K T K+ + K+K+S G+KL+
Sbjct: 612 LLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLE 668
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 168 LELDILRVLLYFDRFGVFPPRLN*KVFDIFDF 73
L ++ V+L+F RF PP LN KVF +F
Sbjct: 238 LTFSLIHVILFFIRFASSPPLLNPKVFSDINF 269
>UniRef50_Q8I5J4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 859
Score = 31.1 bits (67), Expect = 4.9
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 103 KARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVI-TDKEKAEKLKQSLPPGLKLKK*SDV 279
K K++K+ K KKN + KFK + TL+I +D E + ++ P +KLKK +++
Sbjct: 197 KKNSKNSKNKKNKKNKKIPKFKFDLNANPETLIINSDINTYEPSQNNVGPEIKLKKKNNI 256
>UniRef50_Q57YE9 Cluster: Putative uncharacterized protein; n=6;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 553
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 157 VKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLKL 261
+ ++ R + Y+ V+ D+E+ E LKQSL GL L
Sbjct: 48 ILYENRSEQLPYSFVLVDEEEGEVLKQSLGSGLSL 82
>UniRef50_Q55BV7 Cluster: Myb domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: Myb domain-containing
protein - Dictyostelium discoideum AX4
Length = 668
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 79 KDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL---PP 249
K IK F K R+K+ + +K+K+ E +K K + R ++EK EK +Q PP
Sbjct: 217 KHIKKFERKQRQKEKEELKLKEK-EELKLKEKEKRKKEREEREEREKQEKQEQEQQQQPP 275
Query: 250 GLKLKK 267
KLK+
Sbjct: 276 KKKLKE 281
>UniRef50_Q3V2G4 Cluster: Adult male small intestine cDNA, RIKEN
full-length enriched library, clone:2010008K21
product:hypothetical protein, full insert sequence; n=3;
Euarchontoglires|Rep: Adult male small intestine cDNA,
RIKEN full-length enriched library, clone:2010008K21
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 71
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 1 IFFVKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKV 171
+ F+ +F +S ++ P E + DF +K +R+ K K KKN + + K+
Sbjct: 10 VAFILLAFFIFSLFTLASIYTSPNERNEDDDFHLKEKRRKRKEFKGKKNCSDEEHKI 66
>UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borrelia
burgdorferi group|Rep: Decorin binding protein A -
Borrelia afzelii
Length = 181
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 133 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 240
K+ +NP +K K+R + + KE+AEKLK+S
Sbjct: 67 KVAENPFIIKAKIRTTSVALKFIQAIKEEAEKLKES 102
>UniRef50_A5FP19 Cluster: Septum formation initiator; n=2;
Flavobacterium|Rep: Septum formation initiator -
Flavobacterium johnsoniae UW101
Length = 110
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 1 IFFVKSVYF--SYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVR 174
+FFV + F +YS F+ E+KD K + + +KD + +K KNPE ++ R
Sbjct: 25 LFFVIWMLFLDNYSYFDHRFLDGQINELKDNKKYYQEEIKKDQEQIKQLKNPEQIEKYAR 84
Query: 175 CSRFL 189
F+
Sbjct: 85 EKYFM 89
>UniRef50_A0EFV2 Cluster: Chromosome undetermined scaffold_94, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_94,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 650
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 10 VKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVK 162
V+S + +Y+ G KLF++++ K I+ LIK K + + ++ N + +K
Sbjct: 65 VESTFLTYNVGNKLFLYHLASHQKIIQSTLIKNSDKITQMLLVQVNVKIIK 115
>UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4;
Pezizomycotina|Rep: DNA-directed RNA polymerase -
Neurospora crassa
Length = 1674
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 52 FVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLV 201
F M + +K+ KD LIK ++ D+ + ++KN E K+ ++++ +LV
Sbjct: 1134 FFEKMTKYVKENKDGLIKEKKGDSSGIIVRKNAE----KILAAKYIRSLV 1179
>UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Sel1
repeat family - Vibrio harveyi HY01
Length = 326
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 133 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 234
KIK PEN K + C+ F YT KA KL+
Sbjct: 257 KIKGQPENQKLLIACAMFGYTPQTIPDSKAVKLR 290
>UniRef50_Q22CC6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 994
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 58 FNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 237
FN+ REIK+ D L + ++D KIKK E +K V + L+ +E K++
Sbjct: 476 FNLNREIKEKYDHLKETLQQDGLQ-KIKKIKEELKLNVDIDDKDFDLICQKQELQNKIEH 534
Query: 238 SLPPGLKLKK*SD 276
KLK+ D
Sbjct: 535 LKNDLDKLKQEKD 547
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,049,966
Number of Sequences: 1657284
Number of extensions: 3807279
Number of successful extensions: 11135
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 10953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11117
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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