Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01007
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 33 0.19
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 31 0.75
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 31 0.75
01_05_0551 + 23169751-23170491 31 0.99
07_03_0544 + 19309026-19310105 30 1.3
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 30 1.3
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 30 1.7
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 2.3
05_07_0162 + 28090579-28091343 29 2.3
03_02_0457 + 8638318-8638336,8640394-8640497,8640613-8640778,864... 29 4.0
11_03_0041 + 9165575-9165800,9166286-9166362 28 5.3
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 28 5.3
07_01_0795 - 6257985-6258149,6258276-6258380,6259196-6259328,626... 28 5.3
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 28 5.3
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 5.3
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 28 7.0
03_05_0755 - 27462388-27463140 28 7.0
01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354... 28 7.0
01_05_0503 - 22779025-22779397,22779602-22779627 28 7.0
07_01_0479 + 3606663-3607448 27 9.2
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 27 9.2
03_03_0162 - 14964106-14964644,14964810-14965020 27 9.2
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 27 9.2
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -3
Query: 466 TPKLVTA*YVLSRHETASSSHRVANVL-RVPAASKAHTGPAGGATHRPAHSGGGTPSRTL 290
TP L A + H AS S VA R AA G G + HRP P L
Sbjct: 120 TPNLADARGLQRYHRQASQSAAVATTCSRCVAADATGCGSLGASRHRPWRPRAAAPRSAL 179
Query: 289 ARTSSPG 269
AR++ G
Sbjct: 180 ARSTFRG 186
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 31.1 bits (67), Expect = 0.75
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 288 ARVREGVPP--PLCAGRCVAPPAGPVCAFDAAGTRRTFATL-CELEAV--SCRESTYYAV 452
AR+R +PP P CA R PP P A D A + T AT+ + AV CR + AV
Sbjct: 140 ARMRPILPPNIPRCASRRQPPPQCPAAAADDAPSTSTAATVKRQRNAVLTRCRSDSRLAV 199
Query: 453 TSLG 464
G
Sbjct: 200 RGGG 203
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 221 QRDWGASKKSAPGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVR 364
+R S + PG+++PG A PS P GGA+ PA T R
Sbjct: 53 RRRGSKSGSTTPGHQTPGVAWPSPYPSGGASPLPAGVSPSPARSTPRR 100
>01_05_0551 + 23169751-23170491
Length = 246
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 412 SSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 275
+S+R+ + R P H G GG HR G+ R A T S
Sbjct: 42 TSNRLLSTCRFPRTPSLHGGGGGGGDHRTTDDDDGSNGRDQAATLS 87
>07_03_0544 + 19309026-19310105
Length = 359
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 239 SKKSAPGYESPG*AGPSEGPRGGATAAVCRAVRGPAG 349
+K+S G +PG GP GGA AAV A G AG
Sbjct: 101 NKRSRSGGAAPGGGVGRGGPGGGAAAAVSSAGGGAAG 137
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -3
Query: 433 SRHETASSSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 275
S TA+++ A AAS A TG A +P SGG T +L SS
Sbjct: 121 SSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKPTASGGATHRLSLISASS 173
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 174 SDCMDKSRLRQSTVHSNEIGERQRSQRPDMRAP--GELVRAR-VREGVPPPLCAGRCVAP 344
+D + + Q T+ ++E + + P R P G+ V A V V L +GR V P
Sbjct: 700 NDYTSQHEIAQQTLSTSERQPQPEKKPPRTRPPLPGKAVAALCVASFVVGLLLSGRVVVP 759
Query: 345 PAGPVCAFDAAGTRRTFATLCELEAVSCRES 437
P + A+ + +F+T CE + ES
Sbjct: 760 LLPPGSSSPASNYKTSFSTGCENKRAKLGES 790
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 379 PAASKAHTGPAGGATHRPAHSGGGT--PSRTLARTSSPGALISG 254
P AS H+G GG + GGG+ P LA + +P A SG
Sbjct: 64 PTASTKHSGSGGGGGAASNNGGGGSAPPPGNLAGSGTPPAKGSG 107
>05_07_0162 + 28090579-28091343
Length = 254
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 312 PPLCAGRCVAPPAGPV 359
PPL GRCV PP PV
Sbjct: 52 PPLAGGRCVGPPLYPV 67
>03_02_0457 +
8638318-8638336,8640394-8640497,8640613-8640778,
8641403-8641467
Length = 117
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 215 SFQRDWGASKKSAPGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVR 364
S+++ +G+ KK G PG GP GP GG +RGP + +R
Sbjct: 47 SYRKGYGSGKKWDGG---PGGGGPGGGPYGGGRGG-GGGLRGPRTLSDIR 92
>11_03_0041 + 9165575-9165800,9166286-9166362
Length = 100
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 424 ETASSSHRVANVLRVPAASKAHTGPAGGATHRPAHSGGG 308
E + HR A+V R A G GG+ H A G G
Sbjct: 33 EDVAKRHRAASVARARAHCGGGDGKDGGSGHHGARGGSG 71
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 216 HSNEIGERQRSQRPDM-RAPGELVRARVREGVPPPLCAGRCVAPPAG 353
HS++ G+ +RP++ R+ V + G PPP +G PP G
Sbjct: 136 HSDDEGDAPAHRRPEIVRSAAPPVAPPPQMGPPPPYGSGYAPPPPYG 182
>07_01_0795 -
6257985-6258149,6258276-6258380,6259196-6259328,
6260225-6260289,6260569-6261642,6262328-6262433,
6262872-6263044,6263352-6263765
Length = 744
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 345 AGPRTALHTAAV-APPRGPSLGPAHPGLSYPG 253
A P + T V APPR P AHPG + PG
Sbjct: 18 AAPASPARTRVVRAPPRPPRPRLAHPGAAPPG 49
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 348 PAGPRTAL-HTAAVAPPRGPSLGPAHPGLSYPGADFFDAPQSRWNE 214
P G R + HTAA A GP+LG P P F A ++E
Sbjct: 60 PLGHRARMGHTAAAAAAAGPALGLTKPNAVEPPQVSFAAKDVEFSE 105
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 379 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA 266
PA S + P G AT+R SGGG S T + + G+
Sbjct: 92 PANSTSPEPPGGAATNRRGSSGGGGFSATGGQAGTNGS 129
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = -2
Query: 314 RWHPLADPRSDQLTRGSHIRALTSLTLPNL-----VGMNGRLAQSAFIHTVTKTIQTKT 153
+W PL + + G H+R + ++ NL G +G+ A S+F+ T T
Sbjct: 184 QWRPLPTVSENPIFAGGHLRGVKPMSFGNLGGGGGAGGSGKAAASSFLQLPLSTAAAAT 242
>03_05_0755 - 27462388-27463140
Length = 250
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +1
Query: 292 GSARGCH--RRCVQGGAW--PRRQDQCAPLMQPER 384
G +R C RR +Q W RR+DQCA + QP R
Sbjct: 169 GHSRQCFDDRRRLQSCCWCCHRRRDQCAAVPQPAR 203
>01_05_0799 + 25334460-25334994,25335060-25335236,25335325-25335447,
25335559-25335624,25335717-25336685,25336791-25336912,
25337156-25337549,25337888-25338009,25338253-25338646,
25338983-25339104,25339348-25339830,25340291-25340960,
25341713-25342224,25342484-25342540
Length = 1581
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 543 WAYKYKFHKNGINLNHIFLISKLFSKLPNL 454
+A+ +F K G+ HI LI K SKL NL
Sbjct: 1117 YAHVTEFQKRGLPHEHILLIMKPGSKLTNL 1146
>01_05_0503 - 22779025-22779397,22779602-22779627
Length = 132
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 169 LYKQKPFRLTFPTESKYRHHRTAYEIVLIRNTNVARLSN 53
LYK + ++L + E+K+R+ TA IR + LSN
Sbjct: 42 LYKSQEYKLHYTLETKHRNRNTANSKDGIRMAAMENLSN 80
>07_01_0479 + 3606663-3607448
Length = 261
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1
Query: 351 LPAGPRTALHTAAVAPPRGPSLGPAHPGLSYPG 253
+P GP + PP P + P PG PG
Sbjct: 224 MPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPG 256
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 225 EIGERQRS--QRPDMRAPGELVRARVREGVP 311
E+GE ++ + PDM APGE + + R+G+P
Sbjct: 100 EMGEEIKNGEEGPDMAAPGEEEQEQGRKGIP 130
>03_03_0162 - 14964106-14964644,14964810-14965020
Length = 249
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 200 APVYRSFQRDWGASKKSAPGYESPG*AGPSEGPRGG 307
+PV+ Q+ WG + AP + G G EG GG
Sbjct: 79 SPVHERRQQRWGVVNEGAPVFRDGG--GEEEGGEGG 112
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -1
Query: 339 PRTALHTAAVAPPR----GPSLGPAHPGLS 262
P ALHT APP GP+ AHP L+
Sbjct: 130 PSPALHTRTAAPPSHCRPGPAPSGAHPSLA 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,408,128
Number of Sequences: 37544
Number of extensions: 434429
Number of successful extensions: 1832
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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