Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01006X
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.      50   1e-06
AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical...    50   1e-06
Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical...    28   4.2  
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    27   9.7  
U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.
          Length = 290

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +3

Query: 93  EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAEL 236
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEI 52


>AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical
           protein Y105E8A.22 protein.
          Length = 290

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = +3

Query: 93  EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAEL 236
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEI 52


>Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical
           protein ZK856.10 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 129 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 233
           P ++ +I+A  I   R+G CL  Q +F D+++ AE
Sbjct: 79  PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112


>AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical
           protein K01A2.1 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 281 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKS 388
           P D RT F A HP + ID  +  L  E+I  + ++S
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRS 182


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 326 LIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEVA 433
           +IDN  A L+ +K + H+ K V    N   Q  EVA
Sbjct: 349 VIDNSFANLDEKKCQPHVAKCVHDALNAAYQRHEVA 384


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 137 DFRNVSISCTIFCDFIRHRD 78
           D++NV I+ T F DF+ H++
Sbjct: 475 DYKNVKIALTRFSDFMNHKE 494


>U50068-4|AAB37733.1|  287|Caenorhabditis elegans Hypothetical
           protein C01G5.5 protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 353 ENEKIERHIMKSVPGGHNLFVQDKEVASLIENLYSKLKLVLVRKDEQKSAALELISDASM 532
           ENEK     +K++   HN+  +D  + S +    SK    L+RKD  +S  LEL+    +
Sbjct: 47  ENEKDLGLALKTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNES--LELLDRKYL 104

Query: 533 D 535
           D
Sbjct: 105 D 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,643,096
Number of Sequences: 27780
Number of extensions: 289688
Number of successful extensions: 772
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)