Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS01003
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p pro...   143   2e-34
AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC pr...   143   2e-34
AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC...   143   2e-34
AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB...   143   2e-34
AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA...   143   2e-34
Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent polype...   141   8e-34
BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    92   7e-19
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    92   7e-19
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    92   7e-19
AE014298-1999|AAF48342.2|  261|Drosophila melanogaster CG13402-P...    36   0.061
AY089364-1|AAL90102.1|  262|Drosophila melanogaster AT18706p pro...    34   0.19 
BT028841-1|ABI34222.2|  262|Drosophila melanogaster RT01104p pro...    32   0.57 
BT028811-1|ABI34192.2|  262|Drosophila melanogaster RT01004p pro...    32   0.57 
AY070860-1|AAL48482.1|  169|Drosophila melanogaster GM13744p pro...    32   0.57 
AF160890-1|AAD46830.1|  169|Drosophila melanogaster BcDNA.GM0532...    32   0.57 
AF151116-1|AAF06076.1|  169|Drosophila melanogaster beta NAC hom...    32   0.57 
AE014298-2032|AAF48370.1|  262|Drosophila melanogaster CG32601-P...    32   0.57 
AE014298-2031|AAN09588.1|  262|Drosophila melanogaster CG32598-P...    32   0.57 
AE013599-1596|AAM68610.1|  169|Drosophila melanogaster CG3644-PB...    32   0.57 
AE013599-1595|AAF58449.1|  169|Drosophila melanogaster CG3644-PA...    32   0.57 
AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA...    31   0.99 
AE014296-1811|AAF50161.3|  391|Drosophila melanogaster CG14157-P...    29   7.0  
AE014134-2326|AAF53281.1|  529|Drosophila melanogaster CG15639-P...    28   9.2  

>AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p
           protein.
          Length = 217

 Score =  143 bits (346), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC
           protein.
          Length = 217

 Score =  143 bits (346), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC,
           isoform C protein.
          Length = 217

 Score =  143 bits (346), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB,
           isoform B protein.
          Length = 217

 Score =  143 bits (346), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA,
           isoform A protein.
          Length = 217

 Score =  143 bits (346), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+PDVYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent
           polypeptide associatedcomplex protein alpha subunit
           protein.
          Length = 217

 Score =  141 bits (341), Expect = 8e-34
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAKIE 433
           +RGEKKARKIM KLGLK +QGV RVTIRKSKNILFVIN+P+VYKNPHSDTYIVFGEAKIE
Sbjct: 70  SRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPNVYKNPHSDTYIVFGEAKIE 129

Query: 434 DLSTQATMAAAERFKAPETTATGNDL 511
           DLS QA +AAAE+FKAPE     + +
Sbjct: 130 DLSQQAQVAAAEKFKAPEAAGAADSV 155


>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 91.9 bits (218), Expect = 7e-19
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
 Frame = +2

Query: 236 RQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVF 415
           R+  + +RGE+KAR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI F
Sbjct: 183 REVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFF 242

Query: 416 GEAKIEDLST-----QATMAAAERFK 478
           GE  +ED ST     QA + AAERF+
Sbjct: 243 GEICVEDTSTTSVASQAAVKAAERFR 268


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 91.9 bits (218), Expect = 7e-19
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
 Frame = +2

Query: 236 RQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVF 415
           R+  + +RGE+KAR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI F
Sbjct: 176 REVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFF 235

Query: 416 GEAKIEDLST-----QATMAAAERFK 478
           GE  +ED ST     QA + AAERF+
Sbjct: 236 GEICVEDTSTTSVASQAAVKAAERFR 261


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 91.9 bits (218), Expect = 7e-19
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
 Frame = +2

Query: 236 RQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVF 415
           R+  + +RGE+KAR+I+ KL LKP++ V RVT++K KNIL  I+ PDVY+  HS TYI F
Sbjct: 183 REVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFF 242

Query: 416 GEAKIEDLST-----QATMAAAERFK 478
           GE  +ED ST     QA + AAERF+
Sbjct: 243 GEICVEDTSTTSVASQAAVKAAERFR 268


>AE014298-1999|AAF48342.2|  261|Drosophila melanogaster CG13402-PA
           protein.
          Length = 261

 Score = 35.5 bits (78), Expect = 0.061
 Identities = 21/85 (24%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++   +A  EK+ +  ++ L LK +  +E VTI  + +   V+  P V     +  ++V
Sbjct: 25  HKRFPSSAAAEKRVQATLAMLPLKNIDEIEEVTIEFTNSSKVVLTMPRVQSTAGNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDF-VRKSSTAGPSKVAKAANAPK 108


>AY089364-1|AAL90102.1|  262|Drosophila melanogaster AT18706p
           protein.
          Length = 262

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 21/85 (24%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++    A  EK+ +  ++ L LK +  ++ VTI  + +   V+  P V   P +  ++V
Sbjct: 25  HKRNPSPAVVEKRVQAELAMLPLKTIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDL-VRKSSTAGPSKVAKAANAPK 108


>BT028841-1|ABI34222.2|  262|Drosophila melanogaster RT01104p
           protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++    A  EK+ +  ++ L L+ +  ++ VTI  + +   V+  P V   P +  ++V
Sbjct: 25  HKRNPSPAVVEKRVQAELAMLPLRNIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDL-VRKSSTAGPSKVAKAANAPK 108


>BT028811-1|ABI34192.2|  262|Drosophila melanogaster RT01004p
           protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++    A  EK+ +  ++ L L+ +  ++ VTI  + +   V+  P V   P +  ++V
Sbjct: 25  HKRNPSPAVVEKRVQAELAMLPLRNIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDL-VRKSSTAGPSKVAKAANAPK 108


>AY070860-1|AAL48482.1|  169|Drosophila melanogaster GM13744p
           protein.
          Length = 169

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K+   +   N+P    +  ++T+ + G  +
Sbjct: 33  ATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGE 90


>AF160890-1|AAD46830.1|  169|Drosophila melanogaster BcDNA.GM05329
           protein.
          Length = 169

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K+   +   N+P    +  ++T+ + G  +
Sbjct: 33  ATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGE 90


>AF151116-1|AAF06076.1|  169|Drosophila melanogaster beta NAC
           homolog protein.
          Length = 169

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K+   +   N+P    +  ++T+ + G  +
Sbjct: 33  ATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGE 90


>AE014298-2032|AAF48370.1|  262|Drosophila melanogaster CG32601-PA
           protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++    A  EK+ +  ++ L L+ +  ++ VTI  + +   V+  P V   P +  ++V
Sbjct: 25  HKRNPSPAVVEKRVQAELAMLPLRNIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDL-VRKSSTAGPSKVAKAANAPK 108


>AE014298-2031|AAN09588.1|  262|Drosophila melanogaster CG32598-PA
           protein.
          Length = 262

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +2

Query: 233 HRQQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIV 412
           H++    A  EK+ +  ++ L L+ +  ++ VTI  + +   V+  P V   P +  ++V
Sbjct: 25  HKRNPSPAVVEKRVQAELAMLPLRNIGEIQEVTIEFTNSREVVLTMPKVQGTPPNSFFVV 84

Query: 413 FGEAKIEDLSTQATMAAAERFKAPE 487
            G+  +   ST      A+   AP+
Sbjct: 85  SGDL-VRKSSTAGPSKVAKAANAPK 108


>AE013599-1596|AAM68610.1|  169|Drosophila melanogaster CG3644-PB,
           isoform B protein.
          Length = 169

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K+   +   N+P    +  ++T+ + G  +
Sbjct: 33  ATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGE 90


>AE013599-1595|AAF58449.1|  169|Drosophila melanogaster CG3644-PA,
           isoform A protein.
          Length = 169

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/58 (24%), Positives = 29/58 (50%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K+   +   N+P    +  ++T+ + G  +
Sbjct: 33  ATDDKKLQSSLKKLSVNTIPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGE 90


>AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA
           protein.
          Length = 795

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 15/58 (25%), Positives = 28/58 (48%)
 Frame = +2

Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
           A  +KK +  + KL +  + G+E V I K    +   N+P    +  ++T+ V G  +
Sbjct: 33  ATDDKKLQSSLKKLSVSTIPGIEEVNIIKDDLTVIHFNNPKAQASLSANTFAVTGHGE 90


>AE014296-1811|AAF50161.3|  391|Drosophila melanogaster CG14157-PA
           protein.
          Length = 391

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 384 LYTSGELMTKRMFFDFLIVTLSTPCTGLRPSLLIIFL 274
           LYT     TK+++   L V LST C GL  ++  IF+
Sbjct: 255 LYTRMLQTTKKIYSIVLFVQLSTTCVGLLCTISCIFM 291


>AE014134-2326|AAF53281.1|  529|Drosophila melanogaster CG15639-PA
           protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 594 VLLIDSSLVYTFFVFFFCYWCYR 526
           +++   ++++TFFV F CY  YR
Sbjct: 307 IIVTACAIIFTFFVHFCCYLLYR 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,230,754
Number of Sequences: 53049
Number of extensions: 506857
Number of successful extensions: 1671
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)