Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01003
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical ... 114 6e-26
AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical ... 114 6e-26
U29488-6|AAA68776.1| 161|Caenorhabditis elegans Inhibitor of ce... 33 0.23
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 27 8.5
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 27 8.5
U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulat... 27 8.5
>AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical
protein Y65B4BR.5a protein.
Length = 195
Score = 114 bits (274), Expect = 6e-26
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +2
Query: 239 QQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFG 418
+Q + +R EKKARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDTYI+FG
Sbjct: 51 KQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFG 110
Query: 419 EAKIEDLSTQATMAAAERFK 478
EAKIEDL+ A M+A E K
Sbjct: 111 EAKIEDLTQHAQMSAIENLK 130
>AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical
protein Y65B4BR.5b protein.
Length = 197
Score = 114 bits (274), Expect = 6e-26
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +2
Query: 239 QQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFG 418
+Q + +R EKKARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDTYI+FG
Sbjct: 51 KQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFG 110
Query: 419 EAKIEDLSTQATMAAAERFK 478
EAKIEDL+ A M+A E K
Sbjct: 111 EAKIEDLTQHAQMSAIENLK 130
>U29488-6|AAA68776.1| 161|Caenorhabditis elegans Inhibitor of cell
death protein 1 protein.
Length = 161
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 254 ARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 424
A +KK + + KL + + G+E V + K + N+P V + ++T+ V G A
Sbjct: 40 AADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSA 96
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/96 (26%), Positives = 47/96 (48%)
Frame = +2
Query: 239 QQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFG 418
+ ++ EKK K KL +K ++ +E+ KS+N ++ K +
Sbjct: 490 EDVKAVAEEKKEEKKPGKLPMK-IEKLEKPVDTKSEN-------HELKKVLDDKERALLV 541
Query: 419 EAKIEDLSTQATMAAAERFKAPETTATGNDLPQLEQ 526
E++I++ + + T E FK+ ETT +D+P LE+
Sbjct: 542 ESEIKN-TAEETKPKVESFKSEETTVAIDDMPALEK 576
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/96 (26%), Positives = 47/96 (48%)
Frame = +2
Query: 239 QQIETARGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFG 418
+ ++ EKK K KL +K ++ +E+ KS+N ++ K +
Sbjct: 490 EDVKAVAEEKKEEKKPGKLPMK-IEKLEKPVDTKSEN-------HELKKVLDDKERALLV 541
Query: 419 EAKIEDLSTQATMAAAERFKAPETTATGNDLPQLEQ 526
E++I++ + + T E FK+ ETT +D+P LE+
Sbjct: 542 ESEIKN-TAEETKPKVESFKSEETTVAIDDMPALEK 576
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = -1
Query: 543 CYWCYRCSSCGRSLPVAVVSGALNLSAAAMVACVDKSSI 427
C+W +R C + + G++ A +C DK+ +
Sbjct: 417 CFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGL 455
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/39 (23%), Positives = 18/39 (46%)
Frame = -1
Query: 543 CYWCYRCSSCGRSLPVAVVSGALNLSAAAMVACVDKSSI 427
C+W +R C + + G++ A +C DK+ +
Sbjct: 417 CFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGL 455
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 281 IMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEAK 427
I S K + VER +I+K + +LF + + D +NP IV G+ K
Sbjct: 796 IRSAKNEKSIIPVERCSIQKCREVLFNMITLDNKQNPFCLNCIVKGKVK 844
>U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulated
protein 191 protein.
Length = 97
Score = 27.5 bits (58), Expect = 8.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 570 VYTFFVFFFCYWCY 529
+Y F FFFCY+C+
Sbjct: 46 IYIFCSFFFCYFCF 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,835,934
Number of Sequences: 27780
Number of extensions: 254623
Number of successful extensions: 957
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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