Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01001
(475 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 30 1.4
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 30 1.4
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein. 30 1.4
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA... 30 1.4
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 30 1.4
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB... 30 1.4
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC... 30 1.4
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro... 27 9.8
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ... 27 9.8
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,... 27 9.8
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,... 27 9.8
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 512 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 559
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
Length = 1966
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
isoform A protein.
Length = 1966
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
isoform B protein.
Length = 1985
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
isoform C protein.
Length = 1988
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 238 NSGRKQAAAAQAYYGNLVAGSIVSQLTAAAMVAPTP*GDAKHHPFSTSL 384
NS AAAA A+ A S VS L+ + + P P HHP S++L
Sbjct: 1344 NSSAAAAAAAAAHRAASPASS-VSSLSRQSPLHPVPQSPLSHHPSSSAL 1391
>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
protein.
Length = 1019
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 169 CNIWHWGSVDSISGSRARFQLSGNSGRKQAAAA 267
C +W G +++SG+ FQ + +G QA +A
Sbjct: 516 CALWSNGVYETVSGALMNFQTALQAGLSQACSA 548
>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
protein.
Length = 2422
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 169 CNIWHWGSVDSISGSRARFQLSGNSGRKQAAAA 267
C +W G +++SG+ FQ + +G QA +A
Sbjct: 1919 CALWSNGVYETVSGALMNFQTALQAGLSQACSA 1951
>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
isoform D protein.
Length = 2431
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 169 CNIWHWGSVDSISGSRARFQLSGNSGRKQAAAA 267
C +W G +++SG+ FQ + +G QA +A
Sbjct: 1928 CALWSNGVYETVSGALMNFQTALQAGLSQACSA 1960
>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
isoform C protein.
Length = 2410
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 169 CNIWHWGSVDSISGSRARFQLSGNSGRKQAAAA 267
C +W G +++SG+ FQ + +G QA +A
Sbjct: 1907 CALWSNGVYETVSGALMNFQTALQAGLSQACSA 1939
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,982,277
Number of Sequences: 53049
Number of extensions: 421080
Number of successful extensions: 1084
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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