Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS01000
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 69 8e-13
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 59 6e-10
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 8e-06
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 41 2e-04
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 36 0.005
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 35 0.015
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 31 0.25
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 29 1.00
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 28 1.7
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 3.0
SPBC13G1.10c |mug81||ATP-dependent RNA helicase Slh1|Schizosacch... 27 4.0
SPBC32F12.03c |gpx1||glutathione peroxidase Gpx1|Schizosaccharom... 26 5.3
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 26 5.3
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 26 5.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 5.3
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 26 7.0
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 25 9.3
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 68.9 bits (161), Expect = 8e-13
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +3
Query: 510 NDRGYLASYCDEQLIINISFNQLVKLHSIKI---KGPADKGPKSIKLFINQPRTLDFDQA 680
N +L S DEQL+I I F ++VK+HSI I KG PK+IKL+INQP L F+ A
Sbjct: 156 NPSSFLESDVDEQLMIYIPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDA 215
Query: 681 AGYSSVQDLELTPSDLEGNP--VPLKFVK 761
++ Q +E + + P +PL+FVK
Sbjct: 216 ESFTPTQVIEDIVYEQDDQPTIIPLRFVK 244
Score = 56.0 bits (129), Expect = 6e-09
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 271 GVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV----RQYYGSDVAEEDEDNTVAGHMDLI 438
GV AMPTF+F+ N +ID L G N L+ KV + G+ V G L
Sbjct: 71 GVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPVKGFASLQ 130
Query: 439 TFITKSECECLNEADDHPLAQALKMTGDTLL 531
I + ECLN+ DDH L A + L
Sbjct: 131 GCIENPQLECLNQQDDHDLKSAFNSNPSSFL 161
Score = 45.6 bits (103), Expect = 8e-06
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 77 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF--PRAVFLKVDVD 244
I++ H+ + + +G + VD A WC PC+ I+P F QL +K+ P+ VF KV+VD
Sbjct: 6 IRSYQHWISTIPKSG--YLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVD 61
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 59.3 bits (137), Expect = 6e-10
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +2
Query: 125 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCAVQRVLRASVQCPHSF 298
KLVVVDF ATWC PC+ IAP FEQ + A F+KVDVD+ + + A V SF
Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLS-EIAAEAGVHAMPSF 75
Score = 34.7 bits (76), Expect = 0.015
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 271 GVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVR 369
GV AMP+F Y+N KI+ + G N LE ++
Sbjct: 68 GVHAMPSFFLYKNGEKIEEIVGANPAKLEASIK 100
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 45.6 bits (103), Expect = 8e-06
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 125 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDR 247
K+ VVDF A WC PC+ + PF E+L + +A F+ V+ D+
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADK 76
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 271 GVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 375
GV A+PT + +R ++DR+ G + L + + +Y
Sbjct: 85 GVYALPTMVLFRKGQELDRIVGADVKTLSSLLAKY 119
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 40.7 bits (91), Expect = 2e-04
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +2
Query: 95 FQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDR 247
FQ + N ++++++F A W PC+++ F+Q AVFLK++ ++
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEK 61
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 36.3 bits (80), Expect = 0.005
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 116 AGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 211
A K +++F ATWC C+ +AP +E+L A F
Sbjct: 37 ASKKGALIEFYATWCGHCKSLAPVYEELGALF 68
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 125 KLVVVDFTATWCPPCQRIAPFFEQLPAKF---PRAVFLKVDVD 244
K V+V+F A WC C+R+AP +E L F P +K++ D
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINAD 201
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 34.7 bits (76), Expect = 0.015
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 122 TKLVVVDFTATWCPPCQRIAPFFEQLPAKF 211
TK V+V+F A WC C+ +AP +E+L ++
Sbjct: 373 TKDVLVEFYAPWCGHCKNLAPTYEKLAEEY 402
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 125 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 244
K+++V F A WC C+ +AP +E + + V+VD
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVD 79
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 30.7 bits (66), Expect = 0.25
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 62 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 199
G T+ N +F+ + G LVV F A WC C+++ P +++L
Sbjct: 30 GSNTIELNSKNFRKFVKAKGPSLVV--FYAPWCGYCKKLVPTYQKL 73
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 1.00
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 178 NPLARWTPSCCKVHND*LGSSVSHFSLE 95
NPL RWTP K H G+S S + ++
Sbjct: 442 NPLKRWTPDQAKNHPFITGASFSQYCID 469
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 327 SVDFGPVSVENECGHCTDALSTRCTAHLSTSTL 229
SV+ PVSV+NE H S+R A + TL
Sbjct: 138 SVELNPVSVDNEVAHGLAVFSSRDAAASARDTL 170
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 415 VAGHMDLITFITKSECECLNEADDHP 492
V H+D I FITKS C + E D P
Sbjct: 1285 VVNHIDRIMFITKSLCGEIFEIDKWP 1310
>SPBC13G1.10c |mug81||ATP-dependent RNA helicase
Slh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1935
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 153 LGVHRAKGLPLFSSSYQQSFREQYF 227
LGV+R KGL FSS+++ EQ+F
Sbjct: 471 LGVNRYKGLFYFSSAFRPCPIEQHF 495
>SPBC32F12.03c |gpx1||glutathione peroxidase
Gpx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 158
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 708 ELTPSDLEGNPVPLKFVKSRVFKTFN 785
+L P D +GNP P +K +V N
Sbjct: 6 DLAPKDKDGNPFPFSNLKGKVVLVVN 31
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 340 NTTVLENKVRQYYGSDVAEEDEDNTVAGHM 429
NT+ + + + +YGSD+ E ++D A M
Sbjct: 366 NTSFVSSNINNWYGSDLEELEQDVKTAKSM 395
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 FQTEMANAGTKL-VVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV 235
+ E+ +A ++ VVV P C+ +A E+L +P+ F+K+
Sbjct: 97 YTAEVTDASKEVFVVVHMFQDSLPACKLLAAILERLAPMYPQIKFVKI 144
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 306 SVENECGHCTDALSTRCTAHLSTSTLRNT 220
++ N H T S+ T+HL T+TL +T
Sbjct: 3720 TMHNTVSHATSTSSSFTTSHLPTNTLAST 3748
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 675 QAAGYSSVQDLELTPSDLEGNPVPLKFVKSRV 770
+ AG +V L+ T S L+GNP L+ VK +V
Sbjct: 486 RVAGSDTVLPLDKTFSSLDGNPT-LELVKKKV 516
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -1
Query: 327 SVDFGPVSVENECGHCTDALSTRCTAHLSTSTLRNTALGNFAGSCSKKGAILW 169
S+DF +++ GH S H T + A+G++ C+K I W
Sbjct: 170 SIDFPYLNILVSGGHTMLVYSNSLLNHEIIVTTSDIAVGDYLDKCAKYLGIPW 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,983,956
Number of Sequences: 5004
Number of extensions: 56726
Number of successful extensions: 170
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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