Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00997
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q82EN8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q3W4M2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A4VBX4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q5AXC7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_Q82EN8 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces avermitilis|Rep: Putative uncharacterized
           protein - Streptomyces avermitilis
          Length = 558

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 109 GGRPIGYSPPSGRTAGTVPSG 47
           GGRP+  SPPSGR+AG +P G
Sbjct: 392 GGRPV--SPPSGRSAGAIPRG 410


>UniRef50_Q3W4M2 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 380

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 109 GGRPIGYSPPSGRTAGTVPSGET*RGPSPG 20
           GG P G +PP G +AG+  SG    GP+ G
Sbjct: 223 GGAPTGDAPPDGTSAGSATSGGVANGPAGG 252


>UniRef50_A4VBX4 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides uniformis|Rep: Putative uncharacterized
           protein - Bacteroides uniformis
          Length = 216

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 547 YSRSEPLGGSVRGPVSTSRPHIFTQSSVFSFSNRLTGESSTW 422
           Y+R  PL G  +  V T++PH    S +   SN + G    W
Sbjct: 9   YARQTPLNGKRKALVITNQPHAINDSFILKKSNTVYGAQGWW 50


>UniRef50_Q5AXC7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 275

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 109 GGRPIGYSPPSGRTAGTVPSGET*RGPSPGGHS 11
           GG   G S P G +  +VP G +  G SPGG S
Sbjct: 232 GGSSSGSSSPGGSSGDSVPGGSSPGGSSPGGGS 264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,185,516
Number of Sequences: 1657284
Number of extensions: 12417943
Number of successful extensions: 29185
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29071
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)