Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00997
(612 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 26 0.22
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 26 0.22
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.29
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 23 2.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 3.5
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.2
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 8.2
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 8.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.2
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 26.2 bits (55), Expect = 0.22
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -2
Query: 110 RGPPHRLQPPLRE--DSGDRPLGGDIAGAIP 24
+GPPH+ QPP+++ + G +P G+ A A+P
Sbjct: 201 QGPPHQ-QPPIQQQPNQGQQP-PGNTAAALP 229
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 112 YGGRPIGYSPPSG 74
YGG P G PP G
Sbjct: 65 YGGPPSGGQPPQG 77
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 26.2 bits (55), Expect = 0.22
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -2
Query: 110 RGPPHRLQPPLRE--DSGDRPLGGDIAGAIP 24
+GPPH+ QPP+++ + G +P G+ A A+P
Sbjct: 203 QGPPHQ-QPPIQQQPNQGQQP-PGNTAAALP 231
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.8 bits (54), Expect = 0.29
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 162 LVCVYN-YYVNFSM*NVDIIISMYSWPRSSLYQSVCALIIVI 284
LVC+Y YY++ II +M+ +Y CALII++
Sbjct: 255 LVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILL 296
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/38 (23%), Positives = 16/38 (42%)
Frame = +2
Query: 164 SVRLQLLC*FFNVKC*YNYIYVFVA*KFSLPICMCFDY 277
++ L C + C Y + Y F+ L + +C Y
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYY 260
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 42 VSPEGTVPAVLPEGGL*PMGRPP 110
VSP ++P++ P GG P PP
Sbjct: 196 VSP-ASLPSISPSGGFLPKWLPP 217
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 414 KGSQVEDSPVSRLLKEK 464
+G+QVE SPV+ L +E+
Sbjct: 599 EGNQVEGSPVTSLNREE 615
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 8.2
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 502 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 338
S++RP V N +G+ + I N +R+YV V+ + GG
Sbjct: 69 SSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGG 123
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.2
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 502 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 338
S++RP V N +G+ + I N +R+YV V+ + GG
Sbjct: 70 SSNRPWWERYQPVSYILNTRSGDETALADMISRCNAVGVRIYVDTVINHMTGMGG 124
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.2
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 502 STSRPHIFTQSSVFSFSNRLTGESSTWEPFIRDSNRN*LRVYVTIVVAGLRREGG 338
S++RP V N +G+ + I N +R+YV V+ + GG
Sbjct: 70 SSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGMGG 124
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 312 NLPREATTPPPSRLSPATTIVT 377
N RE T PP ++PA VT
Sbjct: 997 NPSREDCTKPPEPVTPAPPQVT 1018
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,702
Number of Sequences: 336
Number of extensions: 3244
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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