Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00997
         (612 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0996 - 25115643-25115708,25115869-25116107,25116484-251165...    28   5.1  
11_01_0491 + 3789264-3789596,3789999-3790071,3790260-3790327,379...    28   5.1  
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409...    28   6.7  
10_01_0274 - 2901033-2901778,2902475-2902634                           27   8.9  

>12_02_0996 -
           25115643-25115708,25115869-25116107,25116484-25116577,
           25116726-25116864,25116960-25117081,25117261-25117491,
           25117583-25117644,25118335-25118461,25118890-25119183,
           25119266-25119622
          Length = 576

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +3

Query: 3   HFTLCPPGDGPRYVSPEGTVP---AVLPEGGL*PMGRP 107
           HF   P    PRY+  +G  P   A+LPE  L  + RP
Sbjct: 189 HFRPMPSSSPPRYIGVDGMRPLADAILPESDLIEVVRP 226


>11_01_0491 +
           3789264-3789596,3789999-3790071,3790260-3790327,
           3790754-3790842,3791544-3791715,3791839-3791907,
           3792129-3792296,3792666-3792833,3792916-3793011
          Length = 411

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 382 VYVTIVVAGLRREGGGVVASRGR 314
           V V +VVA +R +GGG+  +RGR
Sbjct: 4   VVVVVVVAVMRGDGGGLKGARGR 26


>03_05_0510 +
           25039408-25039455,25040627-25040641,25040832-25040991,
           25041116-25041192,25041324-25042528,25042537-25042621,
           25043068-25043130,25043207-25043263,25043299-25043361,
           25043560-25043643,25043730-25044320,25044535-25044663
          Length = 858

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 15  CPPGDGPRYVSPEGTVPAVLPEGGL*PMGRPPYYILI 125
           CP   GP  +    + P++ P GGL P  R P  +++
Sbjct: 714 CPVASGPEQLPRSSSCPSIGP-GGLPPSSRAPAEVVV 749


>10_01_0274 - 2901033-2901778,2902475-2902634
          Length = 301

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +3

Query: 9   TLCPPGDGPRYVSPEGTVPAVLPEGGL---*PMGRPP 110
           T CPP   P Y SP    P V P  G     P+ RPP
Sbjct: 262 TACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPP 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,648
Number of Sequences: 37544
Number of extensions: 354044
Number of successful extensions: 887
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)