Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00997
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z68493-7|CAA92793.1|  339|Caenorhabditis elegans Hypothetical
           protein C33A12.10 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 242 KFSLPICMCFDYCNTFQII 298
           KF++PI +CF  C TF  I
Sbjct: 158 KFAIPIILCFPLCFTFYFI 176


>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
           protein F38E11.5 protein.
          Length = 1000

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 307 FKYNYLKCITIIKAHTDW*RELLGHEYIDIIIST 206
           F YN L+ +   +AH+D+ R L+ H  +  +IS+
Sbjct: 84  FNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISS 117


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 109  GGRPIGYSPPSGRTAGTVPSGET*RGPSPG 20
            GG P     P+G +  +VP   T  GPSPG
Sbjct: 1440 GGDPSPGPSPNGPSNPSVPESSTGGGPSPG 1469


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,715,311
Number of Sequences: 27780
Number of extensions: 294159
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)