Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00995
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical pr...   128   3e-30
Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical pr...    28   4.9  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    27   6.5  
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        27   6.5  
AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80 prot...    27   6.5  

>Z78413-6|CAB01658.1|  144|Caenorhabditis elegans Hypothetical
           protein T01C3.6 protein.
          Length = 144

 Score =  128 bits (308), Expect = 3e-30
 Identities = 54/84 (64%), Positives = 75/84 (89%)
 Frame = +1

Query: 7   IQAVQVFGRKKTATAVAYYKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 186
           +Q+VQ FGRKKTATAVA+ K+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F  V
Sbjct: 5   VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDV 64

Query: 187 DIRVTVKGGGHVAQVYAIRQAISR 258
           DIR+ V GGGHVAQ+YA+RQA+++
Sbjct: 65  DIRIRVSGGGHVAQIYAVRQALAK 88



 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +3

Query: 255 KALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 425
           KAL+A+Y KYVDE SK+E+K+I   YD+SLLVADPRR E KKFGGPGARARYQKSYR
Sbjct: 88  KALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSYR 144


>Z93372-4|CAB07546.1|  301|Caenorhabditis elegans Hypothetical
           protein BE10.4 protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 282 YVDEASKKEIKDILVQYDRSLLVADPRRCE 371
           + DE  +KE+ D+  QYDRS+ + D  R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180


>Z68341-1|CAA92764.1|  258|Caenorhabditis elegans Hypothetical
           protein F01G4.2 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 120 QTAAVQTSGTYPFARQGKILYGRHQSDSQG 209
           QT  V   GT+   R G  L G H+ D+ G
Sbjct: 113 QTIDVNVLGTFNVIRHGVALMGEHEKDANG 142


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 342 LLVADPRRCEPKKFGGPGARARY 410
           LL  DPR+ E  K   PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387


>Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical
           protein K10G9.3 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 210 WWSCSTSLRYQTSYFKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--F 383
           +W    S+RY         AF +KY+D   K+         D++ LV D  + +P++   
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKR---------DKTKLVDDWTKEKPRRTAI 280

Query: 384 GGP 392
           GGP
Sbjct: 281 GGP 283


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
           protein 1 protein.
          Length = 974

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -1

Query: 216 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 118
           TT LDC  +  H EF+ AE  D RF  + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -1

Query: 216 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 118
           TT LDC  +  H EF+ AE  D RF  + F+ +Q G
Sbjct: 21  TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56


>AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80
           protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +3

Query: 210 WWSCSTSLRYQTSYFKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--F 383
           +W    S+RY         AF +KY+D   K+         D++ LV D  + +P++   
Sbjct: 230 YWKARRSMRYSNDLVDVADAFRKKYLDSDDKR---------DKTKLVDDWTKEKPRRTAI 280

Query: 384 GGP 392
           GGP
Sbjct: 281 GGP 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,061,280
Number of Sequences: 27780
Number of extensions: 234303
Number of successful extensions: 651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)