Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00994X
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   0.78 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      20   9.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    20   9.6  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 211 YINLFDNLFVIKDLITRREGKCHFVTFGSMCIVTYLKPTSYISDYTTE 68
           Y N F +  VI++    +  +   V  G   I TY+  T+Y S Y  E
Sbjct: 166 YPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMRE 213


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 169 ITRREGKCHFVTFGSMCIVTYLKPTSYISDY 77
           +TRR+G   + + GS  I   L    Y+  Y
Sbjct: 190 LTRRQGYVIYSSLGSFFIPLLLMSLVYLEIY 220


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 169 ITRREGKCHFVTFGSMCIVTYLKPTSYISDY 77
           +TRR+G   + + GS  I   L    Y+  Y
Sbjct: 190 LTRRQGYVIYSSLGSFFIPLLLMSLVYLEIY 220


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 169 ITRREGKCHFVTFGSMCIVTYLKPTSYISDY 77
           +TRR+G   + + GS  I   L    Y+  Y
Sbjct: 190 LTRRQGYVIYSSLGSFFIPLLLMSLVYLEIY 220


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 211 YINLFDNLFVIKDLITRREGKCHFVTFGSMCIVTYLKPTSYIS 83
           Y N F +  VI++    +  +   V  G   I TY+  T+Y S
Sbjct: 166 YPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSS 208


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 70  ECQCHSDYLSSLIQIITNGN 11
           + QC++  +  L++   NGN
Sbjct: 64  DLQCYTTCIMKLLRTFKNGN 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,936
Number of Sequences: 438
Number of extensions: 1551
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)