Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00992
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 32 0.39
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 30 2.1
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 29 2.7
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 29 2.7
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical pr... 29 4.8
AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion transpo... 29 4.8
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 29 4.8
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 6.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 6.3
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 6.3
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 6.3
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 6.3
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 28 6.3
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 32.3 bits (70), Expect = 0.39
Identities = 29/102 (28%), Positives = 45/102 (44%)
Frame = +2
Query: 377 GTRATRTSSKITSRANSNSYSTKRELNSSANITIKLSNWMLTLTVQRPPNLGRRKRLHQL 556
G +A + +T + S+SY T +T ++ + T +RPP G L +L
Sbjct: 45 GPKAPKEGHAVTPKTRSSSYETPV-------VTRRV--YRKAQTPERPPRTGDDAALSRL 95
Query: 557 PSQLATHLSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQED 682
SQLA + +Q R L E R LE ++ Q R Q +
Sbjct: 96 QSQLA---QMQQQNRDLATAEKAARKRLEQNQDALQRRLQNN 134
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +2
Query: 371 SCGTRATRTSSKITSRANSNSYSTKRELNSSANITIKLSNWMLTLTVQRPPNLGRRKRLH 550
S + +T +S+ TS A+ S + N+++N+ + W L + ++K
Sbjct: 187 STSSASTSSSTPSTSSASITSSNNNAANNAASNMMNNVM-WQLVAAQMQQKQQQQQKDTQ 245
Query: 551 QLPSQLATHLSLGKQQRHLQDTEHRTR-DVLETGRERGQLRRQE 679
+ Q L KQQ+ QD +++ + ++L+ + QL Q+
Sbjct: 246 KKADQAKKAKELAKQQQKEQDVKNKQQEEILKFLMAQHQLNHQK 289
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1334 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1373
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1356 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1395
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1147 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1186
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1454 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1493
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1334 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1373
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1356 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1395
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1147 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1186
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1454 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1493
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1165 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1204
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 499 NVDRTTTA*PG-ETEKT-TPATESAGDSSLFGKTTTSSSR 612
NVDR TA G E E T TP E+ G+S TTTS S+
Sbjct: 1125 NVDRAETAATGAEVEATSTPTAEAIGNSKDDESTTTSISQ 1164
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 126 TMEPGTNCPQT*GPRRNSARRGSLPTQVQSTITCTTWLRAATTQRGE 266
T+ P T P+T PR G T+V T+T T L + T + E
Sbjct: 718 TLPPETVPPKTEAPRTEVPMTGPSRTEVPMTVTPETGLSSTVTSKTE 764
>Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical
protein K12G11.1 protein.
Length = 749
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 549 CSLFR-LPRLGGRCTVNVSIQFESLIVMFADEFNSLLVE 436
CSL R L +G CT +SI F SLIV F L+E
Sbjct: 429 CSLSRTLVAVGAGCTTQLSIFFSSLIVFSVVIFLGTLLE 467
>AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion
transporter SULP-4 protein.
Length = 749
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 549 CSLFR-LPRLGGRCTVNVSIQFESLIVMFADEFNSLLVE 436
CSL R L +G CT +SI F SLIV F L+E
Sbjct: 429 CSLSRTLVAVGAGCTTQLSIFFSSLIVFSVVIFLGTLLE 467
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 394 DIVEDYFPSEFQLILDQKRIKLIGKHYNQALKLDANVDRTTTA*PGETEK 543
D++ D P I+ +KR + N L L D+T + PG EK
Sbjct: 831 DLLLDNTPDGILAIVPEKRSQFTATELNYLLALSVRSDKTLASQPGALEK 880
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 386 PSCHSLYANDMAFLMPCETSCETTSRQTSEPWLSTRLRTVFTALCSRRP*PSCTSDC 216
PSC S +++ + C SCE++ Q +P S + + C PSC+ C
Sbjct: 343 PSCQSSCSSNAQCVQACLPSCESSCVQQQQP--SVVVVQDSQSSCPSACQPSCSQQC 397
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 578 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 676
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 578 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 676
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 578 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 676
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1244 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1276
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 578 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 676
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 359 RSRTSCGTRATRTSSKITSRANSNSYSTKRELNSSANITIKLSN 490
RSR+ +R+ + R+ S S S KR+L ANI++ S+
Sbjct: 116 RSRSRSSSRSRSPVRESRRRSESRSPSPKRDLQLRANISVSYSS 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,527,720
Number of Sequences: 27780
Number of extensions: 343734
Number of successful extensions: 1258
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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