Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00991
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 172 4e-44
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 111 1e-25
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 111 1e-25
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 111 1e-25
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 111 1e-25
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 71 2e-13
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 36 0.004
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 36 0.005
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.61
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa... 27 2.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 2.4
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 3.2
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 3.2
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 5.6
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 26 5.6
SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2 |Sch... 26 5.6
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 7.5
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 9.9
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 9.9
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 25 9.9
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 172 bits (418), Expect = 4e-44
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 434
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI
Sbjct: 47 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 106
Query: 435 QDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKK 533
QDKEGIPPDQQRLIFAGKQLEDGRT +K
Sbjct: 107 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 139
Score = 172 bits (418), Expect = 4e-44
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 434
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 182
Query: 435 QDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKK 533
QDKEGIPPDQQRLIFAGKQLEDGRT +K
Sbjct: 183 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215
Score = 172 bits (418), Expect = 4e-44
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 434
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 258
Query: 435 QDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKK 533
QDKEGIPPDQQRLIFAGKQLEDGRT +K
Sbjct: 259 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 291
Score = 172 bits (418), Expect = 4e-44
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 434
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKI 334
Query: 435 QDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKK 533
QDKEGIPPDQQRLIFAGKQLEDGRT +K
Sbjct: 335 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367
Score = 171 bits (415), Expect = 1e-43
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 97
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFA 255
TI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 98 TIDNVKSKIQDKEGIPPDQQRLIFA 122
Score = 171 bits (415), Expect = 1e-43
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 173
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFA 255
TI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 174 TIDNVKSKIQDKEGIPPDQQRLIFA 198
Score = 171 bits (415), Expect = 1e-43
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 249
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFA 255
TI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 250 TIDNVKSKIQDKEGIPPDQQRLIFA 274
Score = 171 bits (415), Expect = 1e-43
Identities = 82/85 (96%), Positives = 85/85 (100%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD 325
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFA 255
TI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 326 TIDNVKSKIQDKEGIPPDQQRLIFA 350
Score = 111 bits (266), Expect = 1e-25
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 525 FKK 533
+K
Sbjct: 61 IQK 63
Score = 104 bits (249), Expect = 1e-23
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 108
Score = 104 bits (249), Expect = 1e-23
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 132 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 184
Score = 104 bits (249), Expect = 1e-23
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 208 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 260
Score = 104 bits (249), Expect = 1e-23
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 284 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 336
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 255
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA 46
Score = 84.6 bits (200), Expect = 1e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 120
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 66.1 bits (154), Expect = 4e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 347
GKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
Score = 47.2 bits (107), Expect = 2e-06
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGGM 574
LSDYNIQKESTLHLVLRLRGG+
Sbjct: 360 LSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 111 bits (266), Expect = 1e-25
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 525 FKK 533
+K
Sbjct: 61 IQK 63
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 255
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA 46
Score = 84.6 bits (200), Expect = 1e-17
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 150
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 66.1 bits (154), Expect = 4e-12
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 377
GKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 47 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/33 (72%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 604
LSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 111 bits (266), Expect = 1e-25
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 525 FKK 533
+K
Sbjct: 61 IQK 63
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 255
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA 46
Score = 84.6 bits (200), Expect = 1e-17
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 150
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 66.1 bits (154), Expect = 4e-12
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 377
GKQLEDGRTLSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 47 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/33 (72%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGG-MQIFVKTLTGK 604
LSDYNIQKESTLHLVLRLRGG ++ +K L K
Sbjct: 56 LSDYNIQKESTLHLVLRLRGGIIEPSLKALASK 88
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 111 bits (266), Expect = 1e-25
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 525 FKK 533
+K
Sbjct: 61 IQK 63
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 255
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA 46
Score = 84.6 bits (200), Expect = 1e-17
Identities = 53/111 (47%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT T +
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKTYTTPKKIKH 93
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFAASSWKTDAP-CQTTTFKKNPHSILYC 330
+ V+ + + D + + + P C +TF N LYC
Sbjct: 94 KHKKVELAVLKYYKVEDDG-----SVKRLRRECPNCGASTFMANHKDRLYC 139
Score = 65.3 bits (152), Expect = 8e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 344
GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 47 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
Score = 46.4 bits (105), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGG 571
LSDYNIQKESTLHLVLRLRGG
Sbjct: 56 LSDYNIQKESTLHLVLRLRGG 76
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 111 bits (266), Expect = 1e-25
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRT
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 525 FKK 533
+K
Sbjct: 61 IQK 63
Score = 91.5 bits (217), Expect = 1e-19
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 255
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFA
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFA 46
Score = 84.6 bits (200), Expect = 1e-17
Identities = 53/111 (47%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 180
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG K KT T +
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----GKKRKKKTYTTPKKIKH 93
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFAASSWKTDAP-CQTTTFKKNPHSILYC 330
+ V+ + + D + + + P C +TF N LYC
Sbjct: 94 KHKKVELAVLKYYKVEDDG-----SVKRLRRECPNCGASTFMANHKDRLYC 139
Score = 65.3 bits (152), Expect = 8e-12
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 344
GKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 47 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQD 32
Score = 46.4 bits (105), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 509 LSDYNIQKESTLHLVLRLRGG 571
LSDYNIQKESTLHLVLRLRGG
Sbjct: 56 LSDYNIQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 70.9 bits (166), Expect = 2e-13
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQT 518
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + ++
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAES 58
Score = 61.3 bits (142), Expect = 1e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAASSWKTD 276
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+A D
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADD 53
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 117
P QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 38 PSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 255 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 344
GKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 47 GKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 572 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD 667
M I VKTLTGK I L+++ +D + +K ++++
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEE 32
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 518 YNIQKESTLHLVLRLRGG 571
Y+++ S LHLVL LRGG
Sbjct: 59 YHLEGGSVLHLVLALRGG 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 372 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKKN 536
GK LE+E ++T +K ++ +PP++Q++I G QL+D + K N
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPN 64
Score = 32.3 bits (70), Expect = 0.065
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 145 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAASSWKTDAPCQTTTFKKN 309
GK LE+E ++T +K ++ +PP++Q++I K D + K N
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPN 64
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 4 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 108
++QRLI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 42 ERQRLIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 31.1 bits (67), Expect = 0.15
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +3
Query: 345 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTT 524
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D + +T
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 525 FKKNPHSI 548
++ HSI
Sbjct: 64 I-QDGHSI 70
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 39 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGH 182
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +2
Query: 266 GRRTHLVRLQHSKRIHTPSCTASSWRHADLRKNSDRKDHHFGSRSFGH 409
G R V L ++H P + A+ ++N HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +1
Query: 511 VRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGH 636
V L ++H P + A+ +EN HHF R F +
Sbjct: 149 VLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPACUNK4.17 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 166 VEASDTIENVKAKIQDKEGIPPDQQRLIFAASSWK 270
VE D + A D++ IPP+++ F A+SWK
Sbjct: 265 VEWDDPSGKLNAMPVDEKTIPPEERIPRFTAASWK 299
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 332 SSWRHADLRKNSDRKD-HHFGSRSFGHN*ECEGEDPRQRRNSS*STASH 475
SS+ H +KNS R H + S G+N + E +Q SS +T+SH
Sbjct: 123 SSFDHDYRQKNSPRNSIHRLSNISIGNN-PIDFESSQQNNPSSLNTSSH 170
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 568 STKTQYKMECGFFLNV 521
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 341 STKTQYKMECGFFLNV 294
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 114 STKTQYKMECGFFLNV 67
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.6 bits (56), Expect = 3.2
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Frame = +1
Query: 22 FAGKQLEDGRTLSDYNIQKESTLHL--VLRLRGGMQIFVKTLT-GKTITL-EVEASDTIE 189
F+ LE L I +S LHL V+ G + F K + G T TL ++ AS
Sbjct: 354 FSNNILEGLAELHRLGISHKS-LHLDNVVLFHSGHRTFAKLMDFGFTRTLRDMNASHPFN 412
Query: 190 NVKAKIQD--KEGI-PPDQQRLIFAASSWKTDAPC 285
I + EG+ PP+ FAA+S KTD C
Sbjct: 413 INSQSITNILPEGLYPPEVSESSFAAASRKTDIWC 447
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 181 TIENVKAKIQDKEGIPPDQQRLIFAASSWKTDAPCQTTTFKKNPHSI 321
+ EN+ A G+PP Q L AA+ QTT+F+ N + +
Sbjct: 878 SFENLSANAASPYGLPPQQTPLTNAATQ-------QTTSFQSNANKV 917
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 408 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTCQTTTFKKNPHSI 548
+ EN+ A G+PP Q L A Q QTT+F+ N + +
Sbjct: 878 SFENLSANAASPYGLPPQQTPLTNAATQ-------QTTSFQSNANKV 917
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 203 RSKTKKEFLLINSVSSLRQAAGRRTHLVRLQHSKRIHTPSCTASSWRHADLRKNSD---R 373
R + ++F N R+ R R ++S R P S + R N D R
Sbjct: 195 RRRNSRDFPSNNKDGGYRRNNYRDRDSNRYRNSYRPSRPQREHSPGNYRKERYNVDSRPR 254
Query: 374 KDHHFGSRSFGH 409
++ HF RSF H
Sbjct: 255 RERHFHGRSFAH 266
Score = 25.0 bits (52), Expect = 9.9
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 430 RSKTKKEFLLINSVSSLLASSWKTDALVRLQHSKRIHTPSCTASSWRHADLRENSD---R 600
R + ++F N ++++ R ++S R P S + R N D R
Sbjct: 195 RRRNSRDFPSNNKDGGYRRNNYRDRDSNRYRNSYRPSRPQREHSPGNYRKERYNVDSRPR 254
Query: 601 KDHHFGSRSFGH 636
++ HF RSF H
Sbjct: 255 RERHFHGRSFAH 266
>SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1
Query: 536 ILFECCSLTSASVFQLLASKDETLLIRRNSFFVLDLR 426
ILFE C + Q S E LIR S FV D R
Sbjct: 16 ILFEACRIGLLPRVQRRLSDHERSLIRAGSVFVWDER 52
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 309 ILFECCSLTRCVRLPAACRKDETLLIRRNSFFVLDLR 199
ILFE C + R+ E LIR S FV D R
Sbjct: 16 ILFEACRIGLLPRVQRRLSDHERSLIRAGSVFVWDER 52
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 492 LEDGRTCQTTTFKKNPHSILYCVFVEACRSS*KL*PERPSLWK 620
+E G C+ KNP +IL C EA + L P S+ K
Sbjct: 265 IERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPK 307
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 74 KKNPHSILYCVFVEAC 121
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 301 KKNPHSILYCVFVEAC 348
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 528 KKNPHSILYCVFVEAC 575
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 9.9
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Frame = +3
Query: 279 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIP 455
+ S +++ E + LV F +T++ + + T E + A + E +P
Sbjct: 525 SFSQFSVDNERSTLLVGNPPSNSIYFFLFAKDETVSEQAPIYNSTYELILASLNTSEPVP 584
Query: 456 PDQQRLIFAGKQLEDGRTCQTTTFKKNPHSILYCVFV 566
D + + K+ E T K YC+ V
Sbjct: 585 ADAKFSVIVAKKFEKAACISFTACKILESEDKYCIVV 621
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 483 GKQLEDGRTCQTTTFKKNPHSILYCVFVEA 572
GKQ + RT T F + H +L+C + A
Sbjct: 317 GKQKQTTRTEVTAKFTSSRHVVLFCTDIVA 346
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,072,950
Number of Sequences: 5004
Number of extensions: 67978
Number of successful extensions: 305
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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