Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00990
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 36 0.027
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 36 0.027
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 36 0.027
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 36 0.027
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 36 0.027
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 36 0.027
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 36 0.027
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 36 0.027
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 36 0.027
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.082
Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.3
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 29 2.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81132-8|CAB03429.1| 90|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81132-7|CAB03428.1| 86|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z78416-7|CAI79151.1| 212|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 27 9.4
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 27 9.4
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 27 9.4
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 27 9.4
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 201 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 260
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 261 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 320
Query: 605 AC 610
C
Sbjct: 321 GC 322
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 322 CQTDNQTKLERGATWQK-DDCTSCTCSELG 350
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 35.9 bits (79), Expect = 0.027
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAAC---PCDSRAKTG 556
C+ I T H S CE CQ R + C C R+ G
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKRSALG 239
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 201 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 260
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 261 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 320
Query: 605 AC 610
C
Sbjct: 321 GC 322
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 322 CQTDNQTKLERGATWQK-DDCTSCTCSELG 350
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 35.9 bits (79), Expect = 0.027
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAAC---PCDSRAKTG 556
C+ I T H S CE CQ R + C C R+ G
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKRSALG 239
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 35.9 bits (79), Expect = 0.027
Identities = 32/122 (26%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Frame = +2
Query: 257 PADIVNTTCCQICNEKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECH 436
P I +CC I S C P P V + + G G C +K+
Sbjct: 135 PESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKGTGFPGRCCDKWECVDAELSK 194
Query: 437 GSCDSGTIYNNQTGT-HESACECCQ-PRSTAACPCDSRAKTGRS-DRTGSPTPARCH-CA 604
C+ I T H S CE CQ R + C + K + G PT C C
Sbjct: 195 AKCNHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCPKVNQECTWIGIPTGECCPVCL 254
Query: 605 AC 610
C
Sbjct: 255 GC 256
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 CLVDDQLK-EPGSTWSSADNCTTFSCDRSG 200
C D+Q K E G+TW D+CT+ +C G
Sbjct: 256 CQTDNQTKLERGATWQK-DDCTSCTCSELG 284
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 34.3 bits (75), Expect = 0.082
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 13/91 (14%)
Frame = +2
Query: 299 EKPQALSKCVPKSIPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHG---SCDSGT---- 457
+ P A ++ PS +R HG C N+ I G ECH SCD+G
Sbjct: 321 QNPTAAPYVPTEATPSPVFSSTVRYNPAVHGDCKNRDGIFGIKECHASFLSCDNGVGRVI 380
Query: 458 --IYNNQTGTHESACE----CCQPRSTAACP 532
N T SACE C +PR P
Sbjct: 381 QCADNLVFDTRVSACEFAAICLEPRKPEDVP 411
>Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical
protein T28B8.5 protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +2
Query: 338 IPSSDTVGLIRIPMGAHGLCVNKFPITGFTECHGSCDSGTIY--NNQTGTHE-SAC--EC 502
IP D G P A L V+ T ++ +GSC + T + TGT+ AC C
Sbjct: 238 IPYPDVFGYFAPPGTASSLGVSYVQTTRLSKPYGSCTTKTKLKTTHYTGTYTVEACFRSC 297
Query: 503 CQPRSTAACPCDSRAKTGRSDRT 571
Q + A+C C A + S+ T
Sbjct: 298 MQEKIIASCGCYYPAYSHASNTT 320
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 385 PRPVRQQVPHHRLHGVPRLLRLWNY 459
PRP+ VP RLHGVPRL+ +++Y
Sbjct: 324 PRPLSNGVP--RLHGVPRLVDMYDY 346
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +2
Query: 311 ALSKCVPKSIPSSDTVGLIRIP-MGAHGLCVNKFPITGFTECHGSCDSGTIYNNQTGTHE 487
A++ C P + T IP GA C+ TG T C D ++YN T +
Sbjct: 73 AINACDPNKCSNGGTC----IPSFGAKFTCLCPPHFTG-TTCEADIDECSVYNGTTAGCQ 127
Query: 488 SACECCQPRSTAACPCDS 541
+ C R C C S
Sbjct: 128 NNGTCINNRGGFECQCQS 145
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +2
Query: 311 ALSKCVPKSIPSSDTVGLIRIP-MGAHGLCVNKFPITGFTECHGSCDSGTIYNNQTGTHE 487
A++ C P + T IP GA C+ TG T C D ++YN T +
Sbjct: 73 AINACDPNKCSNGGTC----IPSFGAKFTCLCPPHFTG-TTCEADIDECSVYNGTTAGCQ 127
Query: 488 SACECCQPRSTAACPCDS 541
+ C R C C S
Sbjct: 128 NNGTCINNRGGFECQCQS 145
>Z73422-6|CAH04641.1| 316|Caenorhabditis elegans Hypothetical
protein B0564.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 341 PSSDTVGLIRIPMGAHGLCVN 403
P+S T+G++ IP G H +C N
Sbjct: 243 PNSSTMGIVLIPCGCHVMCQN 263
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 337 HPELRHCRSDPHPDGSPRPVRQQVPHHRL 423
H E RH PHPD ++ HHR+
Sbjct: 89 HREKRHSEHLPHPDPPSHTAKRSTEHHRV 117
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 425 TECHGS-CDSGTIYNNQTGTHESACECCQPRSTAACPCDSRAKTGRSDRTGSPTP 586
T+C GS C G + CEC ST CP + R + T +P P
Sbjct: 1552 TQCIGSRCPYGIRTDGSGCPANGVCECINICSTFNCPQNMECALRRVECTSNPCP 1606
>Z81132-8|CAB03429.1| 90|Caenorhabditis elegans Hypothetical
protein T26E4.10 protein.
Length = 90
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 527 CPCDSRAKTGRS-DRTGSPTPARCHCAACGPG 619
C CD G + D +P P C C CG G
Sbjct: 58 CGCDCWGCCGPTPDPAATPAPCNCGCCGCGWG 89
>Z81132-7|CAB03428.1| 86|Caenorhabditis elegans Hypothetical
protein T26E4.9 protein.
Length = 86
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 527 CPCDSRAKTGRS-DRTGSPTPARCHCAACGPG 619
C CD G + D +P P C C CG G
Sbjct: 54 CGCDCWGCCGPTPDPAATPAPCNCGCCGCGWG 85
>Z78416-7|CAI79151.1| 212|Caenorhabditis elegans Hypothetical
protein C23H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 443 CDSGTIYNNQTGTHESACECCQPRSTAAC 529
C+ +N + TH + C+C P S A C
Sbjct: 112 CEEIVCFNGKPNTHLTECQCEDPYSGAHC 140
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Frame = +2
Query: 485 ESACECCQPRSTAACPCDSRAKTGRSDRTGS---PTPARCHCAACGPGLTKHPKP----G 643
+S CE P ACP G + GS P P GPG P P G
Sbjct: 135 QSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNG 194
Query: 644 HASYSGTKNPVQP 682
H G++ P P
Sbjct: 195 HPGKPGSQGPPGP 207
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 232 CSVADVTNTSSPLRSQLNVVQLSAEDHVEPGSLSW 128
C +A + + +++Q NV++ SAE E GS W
Sbjct: 949 CVLAHLHVQRAKVQNQTNVIEASAEQMAEGGSEEW 983
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 232 CSVADVTNTSSPLRSQLNVVQLSAEDHVEPGSLSW 128
C +A + + +++Q NV++ SAE E GS W
Sbjct: 949 CVLAHLHVQRAKVQNQTNVIEASAEQMAEGGSEEW 983
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 467 NQTGTHESACECCQPRSTAACPCDSRAKTGRSDRTGSPTPARCHCAACGPGLTKHPKPGH 646
NQT ++ + + PR++ DS A + SD T PTP + P
Sbjct: 282 NQTESNAGSVDDYCPRTSIDIGLDSSAPSCSSDATREPTPIKKRGRKKKEQSATEPPIPR 341
Query: 647 ASYSGTKNP 673
+ TKNP
Sbjct: 342 TKRAYTKNP 350
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 467 NQTGTHESACECCQPRSTAACPCDSRAKTGRSDRTGSPTPARCHCAACGPGLTKHPKPGH 646
NQT ++ + + PR++ DS A + SD T PTP + P
Sbjct: 323 NQTESNAGSVDDYCPRTSIDIGLDSSAPSCSSDATREPTPIKKRGRKKKEQSATEPPIPR 382
Query: 647 ASYSGTKNP 673
+ TKNP
Sbjct: 383 TKRAYTKNP 391
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 232 CSVADVTNTSSPLRSQLNVVQLSAEDHVEPGSLSW 128
C +A + + +++Q NV++ SAE E GS W
Sbjct: 949 CVLAHLHVQRAKVQNQTNVIEASAEQMAEGGSEEW 983
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,180,683
Number of Sequences: 27780
Number of extensions: 369735
Number of successful extensions: 1442
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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