Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00990
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.7  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   4.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.3  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 263 DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 361
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 263 DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 361
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 352 HCRS-DPHPDGSPRPVRQQVPHHRLHGVP 435
           HC +  P P G    +++QVP  R  G P
Sbjct: 351 HCGNFPPRPMGPWISIQEQVPRFRYIGPP 379


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -1

Query: 579 GDPVRSDRPVFARESHGHA-AVLRG*QHSHADSCVPVWLL 463
           G P  +  P +A+   G   + +      HADSC  +W+L
Sbjct: 105 GSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCDRLWVL 144


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 526 VSVRLTCEDGTVRPHRVANAGALPLCR 606
           V V L C+  +++ HRV  +   P  R
Sbjct: 32  VDVTLACDGRSLKAHRVVLSACSPYFR 58


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 480 VPVWLL*IVPESQEPWHSVKPVMGNLLTHRPWAPIGMRIRP 358
           VP++     P S EPW S++  +       P  P    I P
Sbjct: 367 VPIYCGNFPPRSMEPWISMQEQIPRFRHIGPSTPFPRFIPP 407


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 533 CDSRAKTGRSDRTGSPTPA 589
           C   + + R  + GSPTPA
Sbjct: 645 CLDASSSRRGSKIGSPTPA 663


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,282
Number of Sequences: 438
Number of extensions: 4334
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)