Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00988
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    74   1e-13
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    74   1e-13
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    31   0.70 
AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical ...    31   0.70 
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = +3

Query: 45  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 224
           MRYV+AYLLAVLGG   P   D++ ILS+VG++AD E  K V++ L GK VE+LIA G  
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60

Query: 225 KLSSMPVG 248
            L S+  G
Sbjct: 61  GLVSVSGG 68


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = +3

Query: 45  MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 224
           M+Y+ AYLLA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 225 KLSSMPVGG 251
           KLSS+P GG
Sbjct: 61  KLSSVPSGG 69


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 90  TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 209
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 90  TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 209
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF106584-6|AAC78220.1|  424|Caenorhabditis elegans Hypothetical
           protein F54A5.1 protein.
          Length = 424

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -3

Query: 253 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 83
           P P       SRP+AI  +TS   S +    +  PS S P+ L +F+ +   GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -3

Query: 205  SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 29
            S +T+ P   ++T +   P +S PT   + ST+ AA V+    T+S  + +  +F VLI
Sbjct: 2254 SVATAGPTGPILTVV---PVSSAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,940,801
Number of Sequences: 27780
Number of extensions: 231205
Number of successful extensions: 724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)