Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00987
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024791-5|AAF60661.2|  468|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical ...    29   4.5  
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p...    28   7.9  

>AC024791-5|AAF60661.2|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.14 protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +3

Query: 306 HYLSIECVIRIKQKKLDNFIIGGWTSCKSARVGTTTPPISAVKHVMRFGLKAGAAVVTKL 485
           H L   C++ +K    D +  GG T C + R       +S  K    F L     ++ KL
Sbjct: 30  HSLCETCIVHLKSDYSDAYGSGGQTQCPTCRA-----VVSKEKRTKNFALTNAVTMIQKL 84

Query: 486 R 488
           R
Sbjct: 85  R 85


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
           protein C26G2.2 protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 342 QKKLDNFIIGGWTSCKSARVGTTTPP 419
           Q   D+F+IG W S +  ++ TTT P
Sbjct: 656 QLSTDDFVIGHWFSTEEMKIETTTEP 681


>AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical
           protein ZC416.6 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 204 ELLPSPMDLSNARGRAKRCLPLY 272
           E +P  +D  N++GR K C P+Y
Sbjct: 556 ECIPKALDFVNSQGRLKFCRPIY 578


>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
            protein T14B4.1 protein.
          Length = 1146

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -3

Query: 550  TGAYRHLQRKCATQLRYKF*GLSLVTTAAPAFKPKRI--TCLTAEIGGVVVPTRADLQEV 377
            T A    QRK   +      G+SL+  A+   KP  +   C T+EI GV     AD+   
Sbjct: 970  TNASTSFQRKIVKENELNDGGISLIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLVA 1029

Query: 376  Q 374
            Q
Sbjct: 1030 Q 1030


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,235,032
Number of Sequences: 27780
Number of extensions: 334988
Number of successful extensions: 693
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)