Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00987
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   6.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.1  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 668 IVSLHWYFNRGMSLVY 621
           +VSL+WY    ++LVY
Sbjct: 8   LVSLYWYLILQIALVY 23


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 321 ECVIRIKQKKLDNFIIGGWTSCKSARVGTTTPPI--SAVKHVMRFGLKAGAAVVTK 482
           +C+  IK+   D  ++ G +  ++ +   T P I  S       F  +   AVV+K
Sbjct: 425 DCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 321 ECVIRIKQKKLDNFIIGGWTSCKSARVGTTTPPI--SAVKHVMRFGLKAGAAVVTK 482
           +C+  IK+   D  ++ G +  ++ +   T P I  S       F  +   AVV+K
Sbjct: 425 DCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 321 ECVIRIKQKKLDNFIIGGWTSCKSARVGTTTPPI--SAVKHVMRFGLKAGAAVVTK 482
           +C+  IK+   D  ++ G +  ++ +   T P I  S       F  +   AVV+K
Sbjct: 425 DCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFNERPAVAVVSK 480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,181
Number of Sequences: 438
Number of extensions: 4432
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)