Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00986
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B48BB Cluster: PREDICTED: similar to GA10159-PA...    35   2.2  
UniRef50_Q11X22 Cluster: Thiol-disulfide isomerase/thioredoxin; ...    35   2.2  
UniRef50_Q58456 Cluster: Putative asparagine synthetase [glutami...    33   6.6  

>UniRef50_UPI00015B48BB Cluster: PREDICTED: similar to GA10159-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA10159-PA - Nasonia vitripennis
          Length = 1202

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
 Frame = +1

Query: 169 VYTGCERTACNLFFIIIERSLVARRSFRFTRAGGRAKTQPGGVGFANSCPRASKRDLTTQ 348
           +YTGC++ + +  F+++++     RS    RA  + K +P     AN  P ++    T  
Sbjct: 472 LYTGCDKKSKDQLFLLVDKDGKFIRSSYQERAISKPKKKP-----ANEIPTSAGASQTKT 526

Query: 349 VCNLLDFTVES--*VIFL--LKTFSLLPPTFQNCFSITQLR*QKIVVFFFQN-*HRAPSK 513
           + N   FT +    V FL  L++   LP      F +++ R  K    F ++  + A  +
Sbjct: 527 IFNYEPFTKDKRMWVAFLDHLQSTDKLPVVI---FILSRNRCDKTANAFSESLLNHAEQR 583

Query: 514 YVKFY*EQSINNLSNTRINIIYVNLLKKKIRVSSNV 621
           YV  + ++SI +L  T   +  V  +++ +++   V
Sbjct: 584 YVGEFFDKSIRHLKGTDSQLPQVRKMQRLLKLGIGV 619


>UniRef50_Q11X22 Cluster: Thiol-disulfide isomerase/thioredoxin;
           n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
           Thiol-disulfide isomerase/thioredoxin - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 189

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 23/53 (43%), Positives = 29/53 (54%)
 Frame = +1

Query: 397 LKTFSLLPPTFQNCFSITQLR*QKIVVFFFQN*HRAPSKYVKFY*EQSINNLS 555
           +K FS+L  T Q   S+T    QK+VV  F N + A   Y K Y EQ I NL+
Sbjct: 18  IKNFSMLNVTNQTVLSLTDYNDQKVVVIIFTNNNCA---YAKLY-EQRIANLA 66


>UniRef50_Q58456 Cluster: Putative asparagine synthetase
           [glutamine-hydrolyzing] 2; n=3; Methanococcales|Rep:
           Putative asparagine synthetase [glutamine-hydrolyzing] 2
           - Methanococcus jannaschii
          Length = 515

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
 Frame = -1

Query: 572 IFIRVFDKLFIDCSQ*NLTYFEG--ARC*F*KKKTTIFCYRNWVIEKQF*KVGGNKENVF 399
           + +++++KL  DC    +  F G  A C F KKK  IFC R+ +  K F       E +F
Sbjct: 117 VILKLYNKLGFDC----VKEFNGMWAFCIFDKKKGLIFCSRDRLGVKPFYYYWDGNEFIF 172

Query: 398 SKNMT*LSTVKSSRLQT*VVRSLLEALGQLLANPTP 291
           S  +  +  VK    +  + +  +E    L   P+P
Sbjct: 173 SSELKGILAVKEINKKENINKDAVELYFALGFIPSP 208


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,517,369
Number of Sequences: 1657284
Number of extensions: 11991010
Number of successful extensions: 28087
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28073
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)