Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00986
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0772 - 7016864-7017012,7017114-7017262,7017346-7017489,701...    28   8.1  
02_02_0400 + 9836045-9837115,9837474-9838577                           28   8.1  

>12_01_0772 -
           7016864-7017012,7017114-7017262,7017346-7017489,
           7017549-7017719,7017907-7018020,7018115-7018215,
           7018296-7018416,7018601-7018830,7019203-7019265,
           7019528-7019570,7019860-7019953,7020428-7020501,
           7020616-7020744,7020940-7021017,7021353-7021639
          Length = 648

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 576 ICKFIKKKNTCKFERNDI 629
           IC  +K+KNTC  ER D+
Sbjct: 590 ICDVLKQKNTCNLERLDL 607


>02_02_0400 + 9836045-9837115,9837474-9838577
          Length = 724

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 300 SHPSWLSLCSPTCSGEPERPP 238
           SHPS  ++CSP CS  P   P
Sbjct: 380 SHPSVAAVCSPWCSAVPPSYP 400


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,325
Number of Sequences: 37544
Number of extensions: 304562
Number of successful extensions: 662
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)