Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00986
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.4  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 443 LLPSYDSRKLSFFFFKISIELLQNMLNFIESN 538
           +L   D+R     FF   ++L  N ++ IESN
Sbjct: 346 MLTHIDARMFKDLFFLQILDLRNNSIDRIESN 377


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 LLPSYDSRKLSFFFFKISIELLQN 514
           L   YD++K +FF     ++ L N
Sbjct: 371 LFSKYDAKKRNFFITMFDLDFLTN 394


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 520 KFY*EQSINNLSNTRINIIYVNLLK 594
           K + ++S NNLS   ++ + +NL++
Sbjct: 342 KRFVDESANNLSIEELDFVKLNLIR 366


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 520 KFY*EQSINNLSNTRINIIYVNLLK 594
           K + ++S NNLS   ++ + +NL++
Sbjct: 357 KRFVDESANNLSIEELDFVKLNLIR 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,772
Number of Sequences: 438
Number of extensions: 3577
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)