Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00984
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.7  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   7.7  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
           RFI D+ R E   S +   WK  A +V
Sbjct: 478 RFITDQIRKEDEESDIAKDWKFAAMVV 504


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 193  KKKLRERRLNAQQNASRSRTLE 258
            K+K  + +LN+ QN  R+ TL+
Sbjct: 1583 KRKENDSKLNSDQNKRRTMTLQ 1604


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 607 TKINYYDHHVLLSSLQIHNFLFDI 536
           TK N   HH LL SL   +  +D+
Sbjct: 68  TKFNPATHHALLQSLLHEHIKYDV 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,875
Number of Sequences: 2352
Number of extensions: 13869
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)