Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00984
(755 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 23 4.1
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 23 4.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.4
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 112 IAVGIAGTLFLGYCVYF 162
IAVG +G +F GY + F
Sbjct: 235 IAVGASGNVFAGYLLVF 251
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 406 RFITDRMKKADESDEIISDWKFAAMVV 432
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 702 CFGRFKTMK 676
CFG++KTMK
Sbjct: 122 CFGKYKTMK 130
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -3
Query: 702 CFGRFKTMK 676
CFG++KTMK
Sbjct: 122 CFGKYKTMK 130
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 474 RFITDRMKKADESDEIISDWKFAAMVV 500
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 511 RFIEDRRRSETSGSFLRSRWKIGAGIV 431
RFI DR + + S WK A +V
Sbjct: 474 RFITDRMKKADESDEIISDWKFAAMVV 500
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 163 DQQRRKDPLFKKKLRERRLN 222
++QR D F K+R+ RLN
Sbjct: 477 EEQRNDDKPFLIKIRQYRLN 496
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 163 DQQRRKDPLFKKKLRERRLN 222
++QR D F K+R+ RLN
Sbjct: 477 EEQRNDDKPFLIKIRQYRLN 496
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,694
Number of Sequences: 438
Number of extensions: 3952
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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