Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00983
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.56 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.3  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 93  LTKFVETDGEGAEPVPSVTEFEEEEDVPARDE 188
           L K  + DGEGA+      E EEEED   + E
Sbjct: 266 LRKRRQNDGEGADDRDDDEENEEEEDGRGQSE 297


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 36  LYSKDNQVHDYNGERTLAGLTKFVE 110
           LY  D  +HD++ +  LAG  + VE
Sbjct: 338 LYINDLSMHDFSRDLMLAGTQQSVE 362


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 722 ADVTKDSRTETASKLSSTVRT 660
           +D  KDSR +T  KLS+   T
Sbjct: 669 SDKLKDSRIKTTEKLSTDPNT 689


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 351 TSIDKQLQHNLENNSTNSLANKMQIFVSIKSKYYN 247
           TSID+Q + +  + + +    K+Q+F     K +N
Sbjct: 37  TSIDQQKEDDFRDGNIDVEDEKVQLFSECLIKKFN 71


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 229 WKSHKRAPRPSVYN 188
           W S K  PR S+Y+
Sbjct: 370 WSSQKSEPRRSIYS 383


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 632 NQFHVYSLSLWSLVVRMFDI 573
           N+ H  S   WSL V MF++
Sbjct: 539 NKGHDISADYWSLGVLMFEL 558


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,571
Number of Sequences: 438
Number of extensions: 3792
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)