Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00982
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.6  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 145 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTK 35
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 624 NFIEVLNSFGAIHQDVGAGTLGAKAPNLTGFG 529
           N ++ +N+    +Q  G   +G  AP+   FG
Sbjct: 325 NHMQAMNNMAGTYQMTGYSAMGMAAPHHQNFG 356


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 144 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 245
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 576  GAGTLGAKAPNLTGFGNIVFVLFVRY 499
            G G+ G+K+P + GF       F++Y
Sbjct: 1119 GPGSTGSKSPPVAGFEESPHSKFLKY 1144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,053
Number of Sequences: 336
Number of extensions: 4288
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)