Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00982
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 151 8e-38
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 151 8e-38
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 71 2e-13
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 67 2e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 31 0.13
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.31
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 29 0.71
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.94
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 28 1.2
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.6
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 28 1.6
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 2.2
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.8
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.8
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 5.0
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 26 6.6
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 26 6.6
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 6.6
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 8.8
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 25 8.8
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 151 bits (367), Expect = 8e-38
Identities = 79/162 (48%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 433
+HLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM +
Sbjct: 536 LHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSE 595
Query: 434 GLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFST 613
L I+ G VNPRDDFK RAR + + + P K +
Sbjct: 596 ELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAY 655
Query: 614 SMKLR-TLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTDA 736
+++ +++ WA+KEG M EENLR RFNI DV LH DA
Sbjct: 656 LNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADA 697
Score = 138 bits (333), Expect = 1e-33
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRL 182
NI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGLKRL
Sbjct: 452 NIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRL 511
Query: 183 AKSDPMVQCINEESGEHIVAGAGE 254
+KSDP V C ESGEHIVAGAGE
Sbjct: 512 SKSDPCVLCTTSESGEHIVAGAGE 535
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 151 bits (367), Expect = 8e-38
Identities = 79/162 (48%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 433
+HLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM +
Sbjct: 536 LHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSE 595
Query: 434 GLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFST 613
L I+ G VNPRDDFK RAR + + + P K +
Sbjct: 596 ELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAY 655
Query: 614 SMKLR-TLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTDA 736
+++ +++ WA+KEG M EENLR RFNI DV LH DA
Sbjct: 656 LNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADA 697
Score = 138 bits (333), Expect = 1e-33
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRL 182
NI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGLKRL
Sbjct: 452 NIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRL 511
Query: 183 AKSDPMVQCINEESGEHIVAGAGE 254
+KSDP V C ESGEHIVAGAGE
Sbjct: 512 SKSDPCVLCTTSESGEHIVAGAGE 535
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 70.5 bits (165), Expect = 2e-13
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 433
++++ L DL ++ I I+ SDPV + ET + S C S +PNK NR+ M +P+
Sbjct: 648 MYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEK 707
Query: 434 GLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPR------VPAPTSWWIA 595
G+ DI+ G+VN K + + K+ + L A P + T
Sbjct: 708 GISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDV 767
Query: 596 PKEFSTSMKLRTLLWWIQWAAKEGVMAEENLRGVRFNIYDVTL 724
K S+K + QW +EG + +E +R V F + DV L
Sbjct: 768 DKNVLNSVK-EYIKQGFQWGTREGPLCDETIRNVNFRLMDVVL 809
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +3
Query: 15 LVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLA 185
L GVD + KT TI + + + + + V +VAVEP NP++LPKL++GL++
Sbjct: 565 LGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTN 624
Query: 186 KSDPMVQCINEESGEHIVAGAGE 254
KS P+ EESGEH + G GE
Sbjct: 625 KSYPLSITKVEESGEHTIFGTGE 647
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 508 KKYEYDVTEARKIWCFGPEGTGPNILVD 591
K Y++D+ +R IW FGP+ G NIL D
Sbjct: 733 KNYDWDLLASRSIWAFGPDDRGTNILRD 760
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 67.3 bits (157), Expect = 2e-12
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRL 182
N+ + G+ +++T T+ + N N+ + + P+VRVA+EP P ++ KLV GL L
Sbjct: 527 NVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGLDML 586
Query: 183 AKSDPMVQCINEESGEHIVAGAGE 254
++DP VQ EE+GEH++ AGE
Sbjct: 587 NQADPCVQIAVEENGEHVIMCAGE 610
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSK 382
IHLE CLKDL E A I I+ S P+V YRET D L +K
Sbjct: 611 IHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 544 IWCFGPEGTGPNILVDCSK 600
I FGP+ GPNIL D +K
Sbjct: 751 IIAFGPKRVGPNILFDKTK 769
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAG 251
PV ++EP + D P L+E L + + DP + + E+G+ ++ G G
Sbjct: 443 PVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMG 491
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 272 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 430
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 29.1 bits (62), Expect = 0.71
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 422 PMPDGLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAP 577
P LP+ +D V + T A+ T + PKPVR ++P P
Sbjct: 594 PSSKQLPQSVDGKTVTANANSTTVAKQPTSNVALTRPKPVRTATSQSKIPKP 645
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 0.94
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 269 CLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGL 439
C++DL++ + K+SD Y T+ ++KS KHN+L K +P+P L
Sbjct: 214 CVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVKKHNKLVKKHKPLPSTL 264
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 141 PADLPKLVEGLKRLAKSD--PMVQCINE 218
P D+ KL EGL++L + D +VQ +NE
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNE 199
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 18 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 110
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 472 PR*LQDSRSVSYKKYEYDVTEARKIWCFGPEGTGPNILVDCSKG--VQYL 615
PR L ++ + Y + E T ++IW P NIL+ S G VQYL
Sbjct: 368 PRFLGETELIFYAEVELSNTTNQQIWAKPPISLDFNILMFTSSGLHVQYL 417
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 407 FMKAQPMPDGLPEDIDEGRVNPRDDFKT-RARYLTKSTNTMLPKPVRFGALAPRVPAPTS 583
F KA P+ D +DE +VN + ++ +A T T +PK R+ LA + P+ ++
Sbjct: 422 FTKATPLKDNESASVDESKVNVLSENQSLQADTATLEQLTPIPK-ARWNQLANKHPSLSN 480
Query: 584 WWIAPKEFSTSMK 622
+P S ++
Sbjct: 481 SAASPPVSSPGLR 493
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 394
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 301 ASMVLLKILKTDLKMDSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRS 146
A+ + IL + D+PAP + D L T+G L + + STS S
Sbjct: 258 AASIFFMILYSARHADNPAPIFFDTADMLLTFVTLGRYLESKAKGSTSAALS 309
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 27 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 116
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 437 LPEDIDEGRVNPRDDFKT 490
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -3
Query: 277 LKTDLKMDSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 164
L + L + +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 396 LSSPLTNSNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 224 RRTHCRWCWRIHLEIC 271
RR HCRWC ++ C
Sbjct: 45 RRHHCRWCGKLFCYNC 60
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 532 EARKIWCFGPEGTGPNILVD--CSKGVQYLNE 621
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 224 RRTHCRWCWRIHLEICLKD 280
R+ HCR C +I + CLK+
Sbjct: 78 RKHHCRICGKIICKYCLKE 96
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -3
Query: 724 ECYIIDVESNTTQILFSHNSFLSGPLNPPQQSP*FH*GTELLWSNPPGCWGRYPRGQST 548
E V +N+ +I+F+ F +N P +L W+ PP P QST
Sbjct: 201 EILYTQVNNNSGRIVFAQRYFAEQAINEMNNFPLHGVRIQLSWARPPS-MALLPSKQST 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,276,473
Number of Sequences: 5004
Number of extensions: 69935
Number of successful extensions: 231
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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