Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00982
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 189 2e-48
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 187 6e-48
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 74 1e-13
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 73 2e-13
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 35 0.054
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.29
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 31 0.88
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.7
U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian ... 29 3.5
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 29 3.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.7
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 8.2
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 28 8.2
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 8.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 189 bits (460), Expect = 2e-48
Identities = 89/162 (54%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 433
+HLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPD
Sbjct: 546 LHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPD 605
Query: 434 GLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFST 613
GL +DI+ G VN RD+FK RA+ L + + + + P P K
Sbjct: 606 GLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQY 665
Query: 614 SMKLR-TLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTDA 736
+++ +++ QWA +EGV+++EN+RGVRFN++DVTLH DA
Sbjct: 666 LNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADA 707
Score = 157 bits (382), Expect = 6e-39
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRL 182
NI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRL
Sbjct: 462 NIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRL 521
Query: 183 AKSDPMVQCINEESGEHIVAGAGE 254
AKSDPMVQCI EESGEHI+AGAGE
Sbjct: 522 AKSDPMVQCIFEESGEHIIAGAGE 545
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 187 bits (456), Expect = 6e-48
Identities = 88/162 (54%), Positives = 114/162 (70%), Gaps = 1/162 (0%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 433
+HLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPMPD
Sbjct: 546 LHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPD 605
Query: 434 GLPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWWIAPKEFST 613
GL +DI+ G V+ RD+FK RA+Y + + + + P P K
Sbjct: 606 GLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGVQY 665
Query: 614 SMKLR-TLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTDA 736
+++ +++ QWA +EGV+++EN+RGVRFN++DVTLH DA
Sbjct: 666 LNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADA 707
Score = 157 bits (382), Expect = 6e-39
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRL 182
NI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRL
Sbjct: 462 NIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRL 521
Query: 183 AKSDPMVQCINEESGEHIVAGAGE 254
AKSDPMVQCI EESGEHI+AGAGE
Sbjct: 522 AKSDPMVQCIFEESGEHIIAGAGE 545
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 73.7 bits (173), Expect = 1e-13
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = +2
Query: 257 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 436
+++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 640 YMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQ 699
Query: 437 LPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWW--IAPKEFS 610
L EDI+ V + + + N L A P P P E
Sbjct: 700 LDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVD 759
Query: 611 ---TSMKLRTLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTD 733
S +L+ QWA +EG + EE +R V+F + D + T+
Sbjct: 760 KHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATE 803
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = +3
Query: 21 GVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 191
G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS
Sbjct: 558 GIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKS 617
Query: 192 DPMVQCINEESGEHIVAGAGE 254
P++ EESGEH++ G GE
Sbjct: 618 YPLLTTRVEESGEHVLLGTGE 638
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = +3
Query: 21 GVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 191
G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK+++GL+++ KS
Sbjct: 433 GIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKS 492
Query: 192 DPMVQCINEESGEHIVAGAGE 254
P++ EESGEH++ G GE
Sbjct: 493 YPLLTTRVEESGEHVLLGTGE 513
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Frame = +2
Query: 257 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 436
+++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 515 YMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQ 574
Query: 437 LPEDIDEGRVNPRDDFKTRARYLTKSTNTMLPKPVRFGALAPRVPAPTSWW--IAPKEFS 610
L EDI+ V + + + N L A P P E
Sbjct: 575 LDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPSEVD 634
Query: 611 ---TSMKLRTLLWWIQWAAKEGVMAEENLRGVRFNIYDVTLHTD 733
S +L+ QWA +EG + EE +R V+F + D + T+
Sbjct: 635 KHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATE 678
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 511 KYEYDVTEARKIWCFGPEGTGPNILVD 591
KY +D+ AR IW FG + TGPNIL+D
Sbjct: 600 KYNWDLLAARSIWAFGLDTTGPNILLD 626
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 NICGLVGVDQFLVKTGTITTFKN-AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKR 179
+IC G+D +T +T +N A + + M PV+ +A++P N D ++ L R
Sbjct: 413 DICATFGLDCHSGET--FSTDQNLAPHCESMHIP-EPVISMAIKPVNRKDADNFIKALTR 469
Query: 180 LAKSDPMVQC-INEESGEHIVAGAGE 254
K DP + N+E+ E IV+G GE
Sbjct: 470 FTKEDPTFRREYNQEAKETIVSGMGE 495
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 361
+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 525 VHLQKCIKDLN-DLGLVDLDVSEPIVPFMETVIEDS 559
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 30 QFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 209
+ L++ T+ + +K+ + +VRV++ + D+ L E LK LA D ++
Sbjct: 450 EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKV 509
Query: 210 INEESGEHIVAGAGE 254
+ E+GE + AGE
Sbjct: 510 MELENGELAMVTAGE 524
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 254 IHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 361
+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 525 VHLQKCIKDLN-DLGLVDLDVSEPIVPFMETVIEDS 559
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 30 QFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 209
+ L++ T+ + +K+ + +VRV++ + D+ L E LK LA D ++
Sbjct: 450 EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKV 509
Query: 210 INEESGEHIVAGAGE 254
+ E+GE + AGE
Sbjct: 510 MELENGELAMVTAGE 524
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 296 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 475
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 476 DDFKT 490
D KT
Sbjct: 287 CDCKT 291
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 31.1 bits (67), Expect = 0.88
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +2
Query: 224 RRTHCRWCWRIHLEICLKDLEEDHACIPIKKSDPV----VSYRETVAEESDQLCLSKSPN 391
RR HCR C R+ C K L D A S+P+ + E E++Q L N
Sbjct: 197 RRHHCRLCGRVLCHSCSKFLSFDTAKTLTSSSNPLGDTHIIVEEPNTVENEQELLQPEEN 256
Query: 392 KHNRLFMKAQPMPD 433
F +Q D
Sbjct: 257 GRRSFFSLSQKSMD 270
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 72 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 194
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 205 CTMGSDLARRLRPSTSLGRS 146
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform b protein.
Length = 199
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 479 DFKTRARYLTKSTNTMLPKPVRFGAL---APRVPAPTSWWIAPKEF 607
D+K R R TKS N P+ FG L P P T+ W A ++
Sbjct: 42 DYKYRPRRKTKSINKKNGAPIPFGNLDTKTPSYPTLTTNWNATNQY 87
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 479 DFKTRARYLTKSTNTMLPKPVRFGAL---APRVPAPTSWWIAPKEF 607
D+K R R TKS N P+ FG L P P T+ W A ++
Sbjct: 126 DYKYRPRRKTKSINKKNGAPIPFGNLDTKTPSYPTLTTNWNATNQY 171
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 169 PSTSLGRSAGFLGSTATRTTGDTLN 95
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 611 TSMKLRTLLWWIQWAAKEGVMAEENLR 691
+S+++ +LW + W E V+ E+NLR
Sbjct: 301 SSLEINYMLWQLVWFVAEKVLNEDNLR 327
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 484 QDSRSVSYKKYEYDVTEARKIWCFGPEGT 570
+ S VSYKK ++D ++ ++ FG +GT
Sbjct: 874 RSSHVVSYKKMKFDFSDGKRTVQFGNDGT 902
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 254 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 144
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 484 QDSRSVSYKKYEYDVTEARKIWCFGPEGT 570
+ S VSYKK ++D ++ ++ FG +GT
Sbjct: 811 RSSHVVSYKKMKFDFSDGKRTVQFGNDGT 839
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 254 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 144
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,394,542
Number of Sequences: 27780
Number of extensions: 409639
Number of successful extensions: 1247
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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