Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00980
         (779 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    30   0.32 
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce...    29   0.75 
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|...    28   1.7  
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    28   1.7  
SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces...    28   1.7  
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    27   3.0  
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc...    27   3.0  
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha...    26   7.0  
SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces...    26   7.0  
SPBC106.15 |idi1||isopentenyl-diphosphate delta-isomerase Idi1|S...    25   9.2  
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi...    25   9.2  

>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3699

 Score = 30.3 bits (65), Expect = 0.32
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +3

Query: 240  LQKSHETFNQRRNRPTEFPEDVFKLSLMQHMPTQFTNLK----EINRSKNRKQ-FMLSLS 404
            LQK +E +++R N   + P+++F   L +HM    + +     +  +  NRKQ F   + 
Sbjct: 3425 LQKIYEIYSERNNFSRDDPKELFTNELSKHMMELNSQISQESTDAEKLANRKQLFSRRIG 3484

Query: 405  FYVNYMSLFWDPDT 446
             + N   L+  P T
Sbjct: 3485 MFENIQKLY-SPST 3497


>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 906

 Score = 29.1 bits (62), Expect = 0.75
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +1

Query: 1   AAVTYFDSKRQKIPNVFDEEKIKFIQCLGKELKFLQALNLQNNRHVVTELKMNFSS 168
           + +T++DSKR+KI   F  EK  ++  +G  L       L  +      LK +FSS
Sbjct: 239 SGLTFYDSKREKICFTFPGEK-HYMTVMGSILALCYTPTLGTDSSTNEGLKKSFSS 293


>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1372

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 73  IQCLGKELKFLQALNLQNNRHVVTELKMNFSSF-MEGLVSKDPPLDDNEYEVKYQESYRK 249
           I C  KELK        NN    + +   + +   + +V+     DDNEY V   E Y  
Sbjct: 501 IDCFYKELKIGNEQG--NNAPGYSSVTSGYGTTNSKKVVASYDNTDDNEYSVSKSELYAT 558

Query: 250 AMRHSTSDETGLQNFQKMY 306
              ++T+++ G +N ++ Y
Sbjct: 559 GDTNNTTNQ-GYENSERKY 576


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
 Frame = +2

Query: 500 SVELFHPELPDDMEREILKQFIKSKYDDLRELNDAAN--------ETAIASAVNVYI-KK 652
           S E    ++PDD E    K+F + K    R+ N A +        +TA+AS   + + K+
Sbjct: 231 SFEYLDKDIPDDGESRDNKRFQEKKNRSERQKNKARDNARLRNLVDTALASDPRIKLFKE 290

Query: 653 MDKATEFKGWWVPTLGIPYIVNLANRSSYHEEAKKA 760
            +KA +    W    G       A +    EE + A
Sbjct: 291 QEKAAKAARKWEREAGAREAAAAAQKKKEEEERRAA 326


>SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 155

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +1

Query: 118 LQNNRHVVTELKMNFSSFMEGLVSKDPPLDDNEYEVKYQESYRKAMRHSTSDETGLQNFQ 297
           L+N  +V  E +    S ++        LDDN  E      +RK M H ++ +  L NF 
Sbjct: 12  LENVDNVKIESENAIPSNLQAFTKSLAVLDDNVSE------FRKRMNHLSATKQILDNFN 65

Query: 298 KMYSNYL 318
           + +S++L
Sbjct: 66  ESFSSFL 72


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
            Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 34   KIPNVFDEEKIKFIQCLGKELKFLQALNLQN 126
            K+P+ FD+E+ K +Q   ++LK L   N  N
Sbjct: 1840 KVPHQFDDEEGKALQIFREKLKDLNCKNSMN 1870


>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
           binuclear cluster type |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 522

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 175 EGLVSKDPPLDDNEYEVKYQESYRKAMRHSTSDETGLQNFQKMYSNYL 318
           +G + +  P+  N    +YQ S R    H T DE+ L +     SN L
Sbjct: 292 QGALPQHIPVPHNTEFAQYQPSSRDLQNHPTVDESRLSSVAPPASNTL 339


>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
           alpha-glucosyltransferase Alg10|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 445

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 305 YIFWKFCRPVSSLVECLMAF 246
           ++FW+F  P+ S  ECLM +
Sbjct: 393 FLFWRFHLPLPSGRECLMEY 412


>SPAC1F5.03c |||FAD-dependent oxidoreductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 382

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +3

Query: 684 GSQLWGFRILSTWLIDLPIT-RKPRKLP 764
           G   WG+R L TW I      ++P KLP
Sbjct: 85  GVNKWGYRALDTWSIKADENCQQPDKLP 112


>SPBC106.15 |idi1||isopentenyl-diphosphate delta-isomerase
           Idi1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 227

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 441 DTCCLHPNDLVNEHNLALEQAL 506
           +TCC HP D+  E    L +A+
Sbjct: 84  NTCCSHPLDVAGERGNTLPEAV 105


>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
           spliced|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 383

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 453 LHPNDLVNEHNLALEQALNYFTPNCQMTWREKYLNSSSSRSMTI 584
           L PN+   + +L   + + Y    C  TW+ ++L  +SS+ + +
Sbjct: 104 LDPNNTYIQKSLHRLKEVYYIYRECAETWQLRHLRVASSQQLPV 147


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,068,043
Number of Sequences: 5004
Number of extensions: 59851
Number of successful extensions: 162
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)