Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00980
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    32   0.53 
Z81138-6|CAB03476.2|  515|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL023844-14|CAO82065.1|  515|Caenorhabditis elegans Hypothetical...    28   8.6  

>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
           protein 8 protein.
          Length = 1206

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
 Frame = +2

Query: 524 LPDDMEREILKQF-IKSKYDDLRELNDAANETAIASAVNVYIK-KMDKATEFKGWW-VPT 694
           L DD++ EI+ Q      Y+ +    D  +   + + +  Y   +MD       +W +P 
Sbjct: 100 LDDDLDVEIISQTGCGESYEGVAVAADMYHLQKVKAFIGPYCNAEMDAVARMAAFWNIPI 159

Query: 695 LG-IPYIVNLANRSSYHEEAKKAAFLIS 775
           +G +    NLA++++Y   A+ +AF+IS
Sbjct: 160 IGYMAASNNLADKNAYPTLARISAFIIS 187


>Z81138-6|CAB03476.2|  515|Caenorhabditis elegans Hypothetical
           protein W05B2.7 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +3

Query: 240 LQKSHETFNQRRNRPTEFPED---VFKLSLMQHMPTQFTNLKEI 362
           L KS E      N+P E P+D   VF    + H+P Q   L E+
Sbjct: 422 LMKSEEKEVCYHNKPLELPDDILFVFVAKNLGHIPDQIRKLMEV 465


>AL023844-14|CAO82065.1|  515|Caenorhabditis elegans Hypothetical
           protein W05B2.7 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +3

Query: 240 LQKSHETFNQRRNRPTEFPED---VFKLSLMQHMPTQFTNLKEI 362
           L KS E      N+P E P+D   VF    + H+P Q   L E+
Sbjct: 422 LMKSEEKEVCYHNKPLELPDDILFVFVAKNLGHIPDQIRKLMEV 465


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,750,747
Number of Sequences: 27780
Number of extensions: 328197
Number of successful extensions: 941
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)