SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00978
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008455-1|AAH08455.1|  259|Homo sapiens uncharacterized hematop...    69   2e-11
AF220052-1|AAF67645.1|  259|Homo sapiens uncharacterized hematop...    69   2e-11
AB097050-1|BAC77403.1|  259|Homo sapiens putative MAPK activatin...    69   2e-11
AK074683-1|BAC11136.1|  135|Homo sapiens protein ( Homo sapiens ...    52   2e-06
BC006005-1|AAH06005.1|  146|Homo sapiens MDS032 protein protein.       51   4e-06
BC021171-1|AAH21171.2|  320|Homo sapiens NUF2 protein protein.         32   2.5  
BC008489-1|AAH08489.1|  464|Homo sapiens NUF2, NDC80 kinetochore...    32   2.5  
AL592435-3|CAI16706.1|  464|Homo sapiens NUF2, NDC80 kinetochore...    32   2.5  
AK093348-1|BAC04140.1|  464|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AF326731-1|AAK01426.1|  464|Homo sapiens NUF2R protein.                32   2.5  
AB050578-1|BAB59142.1|  303|Homo sapiens kinetochore protein Nuf...    32   2.5  
AB050577-1|BAB59141.1|  464|Homo sapiens kinetochore protein Nuf...    32   2.5  
M90359-1|AAA58363.1|  427|Homo sapiens protein kinase protein.         31   4.3  
BC131516-1|AAI31517.1|  427|Homo sapiens A kinase (PRKA) anchor ...    31   4.3  
BC057229-1|AAH57229.1|  298|Homo sapiens AKAP5 protein protein.        31   4.3  
BC112121-1|AAI12122.1|  478|Homo sapiens growth arrest-specific ...    31   5.7  
BC104785-1|AAI04786.1|  478|Homo sapiens growth arrest-specific ...    31   5.7  
BC047686-1|AAH47686.1|  565|Homo sapiens bridging integrator 2 p...    31   5.7  
AL592435-2|CAI16705.1|  202|Homo sapiens NUF2, NDC80 kinetochore...    31   5.7  
AK000783-1|BAA91376.1|  342|Homo sapiens protein ( Homo sapiens ...    31   5.7  
AF146531-1|AAD54227.1|  564|Homo sapiens bridging integrator-2 p...    31   5.7  
AF050079-1|AAC69519.1|  478|Homo sapiens growth arrest specific ...    31   5.7  
AF050078-1|AAC69518.1|  478|Homo sapiens growth arrest specific ...    31   5.7  
AB032710-1|BAA88125.1|  565|Homo sapiens breast cancer associate...    31   5.7  
AB032698-1|BAA88108.1|  565|Homo sapiens breast cancer associate...    31   5.7  

>BC008455-1|AAH08455.1|  259|Homo sapiens uncharacterized
           hematopoietic stem/progenitor cells protein MDS032
           protein.
          Length = 259

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = -3

Query: 478 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTD 299
           S   S  ++D +L+ HQN+QEK+AE M+ L ++LK  +  A ++IK D + L  S  + D
Sbjct: 150 SEKQSAAELDLVLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209

Query: 298 RNLSSLKVESERLQ 257
           +NL  LK ESERL+
Sbjct: 210 QNLEKLKTESERLE 223



 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = -1

Query: 741 DILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHG----AATMSVDATQEIHQKTVA 574
           ++++EYS +  FLKG++Q   L++  EK  A Q L+ G     A   V AT+ +H ++ A
Sbjct: 56  EVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRA 115

Query: 573 KYGVELRSELFGLDDNDDSL 514
           +Y  E+RSEL G D  +  +
Sbjct: 116 RYTSEMRSELLGTDSAEPEM 135



 Score = 37.1 bits (82), Expect = 0.066
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 254 HSRSAWKCWLWIMLAVVMVIFINMVLFMKVMKKRK 150
           H++ +    LW ML +V  IFI+M+LF+++M K K
Sbjct: 225 HTQKSVNWLLWAMLIIVCFIFISMILFIRIMPKLK 259


>AF220052-1|AAF67645.1|  259|Homo sapiens uncharacterized
           hematopoietic stem/progenitor cells protein MDS032
           protein.
          Length = 259

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = -3

Query: 478 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTD 299
           S   S  ++D +L+ HQN+QEK+AE M+ L ++LK  +  A ++IK D + L  S  + D
Sbjct: 150 SEKQSAAELDLVLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209

Query: 298 RNLSSLKVESERLQ 257
           +NL  LK ESERL+
Sbjct: 210 QNLEKLKTESERLE 223



 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = -1

Query: 741 DILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHG----AATMSVDATQEIHQKTVA 574
           ++++EYS +  FLKG++Q   L++  EK  A Q L+ G     A   V AT+ +H ++ A
Sbjct: 56  EVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRA 115

Query: 573 KYGVELRSELFGLDDNDDSL 514
           +Y  E+RSEL G D  +  +
Sbjct: 116 RYTSEMRSELLGTDSAEPEM 135



 Score = 37.1 bits (82), Expect = 0.066
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 254 HSRSAWKCWLWIMLAVVMVIFINMVLFMKVMKKRK 150
           H++ +    LW ML +V  IFI+M+LF+++M K K
Sbjct: 225 HTQKSVNWLLWAMLIIVCFIFISMILFIRIMPKLK 259


>AB097050-1|BAC77403.1|  259|Homo sapiens putative MAPK activating
           protein protein.
          Length = 259

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = -3

Query: 478 SNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTD 299
           S   S  ++D +L+ HQN+QEK+AE M+ L ++LK  +  A ++IK D + L  S  + D
Sbjct: 150 SEKQSAAELDLVLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMAD 209

Query: 298 RNLSSLKVESERLQ 257
           +NL  LK ESERL+
Sbjct: 210 QNLEKLKTESERLE 223



 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = -1

Query: 741 DILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHG----AATMSVDATQEIHQKTVA 574
           ++++EYS +  FLKG++Q   L++  EK  A Q L+ G     A   V AT+ +H ++ A
Sbjct: 56  EVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRA 115

Query: 573 KYGVELRSELFGLDDNDDSL 514
           +Y  E+RSEL G D  +  +
Sbjct: 116 RYTSEMRSELLGTDSAEPEM 135



 Score = 37.1 bits (82), Expect = 0.066
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -2

Query: 254 HSRSAWKCWLWIMLAVVMVIFINMVLFMKVMKKRK 150
           H++ +    LW ML +V  IFI+M+LF+++M K K
Sbjct: 225 HTQKSVNWLLWAMLIIVCFIFISMILFIRIMPKLK 259


>AK074683-1|BAC11136.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90202 fis, clone MAMMA1001634. ).
          Length = 135

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -1

Query: 741 DILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHG----AATMSVDATQEIHQKTVA 574
           ++++EYS +  FLKG++Q   L++  EK  A Q L+ G     A   V AT+ +H ++ A
Sbjct: 56  EVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRA 115

Query: 573 KYGVELRSELFGLDDNDDS 517
           +Y  E+RSEL G D   +S
Sbjct: 116 RYTSEMRSELLGTDSAGES 134


>BC006005-1|AAH06005.1|  146|Homo sapiens MDS032 protein protein.
          Length = 146

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
 Frame = -1

Query: 741 DILSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHG----AATMSVDATQEIHQKTVA 574
           ++++EYS +  FLKG++Q   L++  EK  A Q L+ G     A   V AT+ +H ++ A
Sbjct: 56  EVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARERVPATKTVHLQSRA 115

Query: 573 KYGVELRSELFGLDDNDDSL 514
           +Y  E+RSEL G D  +  +
Sbjct: 116 RYTSEMRSELLGTDSAEPEM 135


>BC021171-1|AAH21171.2|  320|Homo sapiens NUF2 protein protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 27  SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 59


>BC008489-1|AAH08489.1|  464|Homo sapiens NUF2, NDC80 kinetochore
           complex component, homolog (S. cerevisiae) protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 203


>AL592435-3|CAI16706.1|  464|Homo sapiens NUF2, NDC80 kinetochore
           complex component, homolog (S. cerevisiae) protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 203


>AK093348-1|BAC04140.1|  464|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36029 fis, clone TESTI2016950. ).
          Length = 464

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 203


>AF326731-1|AAK01426.1|  464|Homo sapiens NUF2R protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 203


>AB050578-1|BAB59142.1|  303|Homo sapiens kinetochore protein Nuf2
           protein.
          Length = 303

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 10  SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 42


>AB050577-1|BAB59141.1|  464|Homo sapiens kinetochore protein Nuf2
           protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKTV 577
           S P+E+ E  +QLS G   +     Q+ HQKT+
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKTI 203


>M90359-1|AAA58363.1|  427|Homo sapiens protein kinase protein.
          Length = 427

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 693 VQTAT-LSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDS 517
           +QT T L+    K ++ Q LS G +    D   E +       G ++ S   GLD+   +
Sbjct: 163 IQTQTPLNDQATKAKSTQDLSEGISQKDGDEVCESNVSNSITSGEKVISVELGLDNGHSA 222

Query: 516 LRKGTLLKHQI 484
           ++ GTL+  +I
Sbjct: 223 IQTGTLILEEI 233


>BC131516-1|AAI31517.1|  427|Homo sapiens A kinase (PRKA) anchor
           protein 5 protein.
          Length = 427

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 693 VQTAT-LSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDS 517
           +QT T L+    K ++ Q LS G +    D   E +       G ++ S   GLD+   +
Sbjct: 163 IQTQTPLNDQATKAKSTQDLSEGISRKDGDEVCESNVSNSITSGEKVISVELGLDNGHSA 222

Query: 516 LRKGTLLKHQI 484
           ++ GTL+  +I
Sbjct: 223 IQTGTLILEEI 233


>BC057229-1|AAH57229.1|  298|Homo sapiens AKAP5 protein protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 693 VQTAT-LSTPIEKLEAVQQLSHGAATMSVDATQEIHQKTVAKYGVELRSELFGLDDNDDS 517
           +QT T L+    K ++ Q LS G +    D   E +       G ++ S   GLD+   +
Sbjct: 163 IQTQTPLNDQATKAKSTQDLSEGISRKDGDEVCESNVSNSITSGEKVISVELGLDNGHSA 222

Query: 516 LRKGTLLKHQI 484
           ++ GTL+  +I
Sbjct: 223 IQTGTLILEEI 233


>BC112121-1|AAI12122.1|  478|Homo sapiens growth arrest-specific 8
           protein.
          Length = 478

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 463 QEDIDSILKYHQN-MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLS 287
           ++ +  +L  HQN + E  AE  V++ K  +++ +I  ++++ D  ALK   +L ++ L+
Sbjct: 99  KQKVKHLLYEHQNNLTEMKAEGTVVM-KLAQKEHRIQESVLRKDMRALK--VELKEQELA 155

Query: 286 S-LKVESERLQDTVEV 242
           S + V++ RL+ T E+
Sbjct: 156 SEVVVKNLRLKHTEEI 171


>BC104785-1|AAI04786.1|  478|Homo sapiens growth arrest-specific 8
           protein.
          Length = 478

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 463 QEDIDSILKYHQN-MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLS 287
           ++ +  +L  HQN + E  AE  V++ K  +++ +I  ++++ D  ALK   +L ++ L+
Sbjct: 99  KQKVKHLLYEHQNNLTEMKAEGTVVM-KLAQKEHRIQESVLRKDMRALK--VELKEQELA 155

Query: 286 S-LKVESERLQDTVEV 242
           S + V++ RL+ T E+
Sbjct: 156 SEVVVKNLRLKHTEEI 171


>BC047686-1|AAH47686.1|  565|Homo sapiens bridging integrator 2
           protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -1

Query: 735 LSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEI 592
           LS  S+R+  +   V+TAT+S+P+    +   LS  + + SV AT+++
Sbjct: 252 LSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDL 299


>AL592435-2|CAI16705.1|  202|Homo sapiens NUF2, NDC80 kinetochore
           complex component, homolog (S. cerevisiae) protein.
          Length = 202

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 675 STPIEKLEAVQQLSHGAATMSVDATQEIHQKT 580
           S P+E+ E  +QLS G   +     Q+ HQKT
Sbjct: 171 SVPVEEQEEFKQLSDGIQELQQSLNQDFHQKT 202


>AK000783-1|BAA91376.1|  342|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20776 fis, clone COL05962. ).
          Length = 342

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -1

Query: 735 LSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEI 592
           LS  S+R+  +   V+TAT+S+P+    +   LS  + + SV AT+++
Sbjct: 29  LSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDL 76


>AF146531-1|AAD54227.1|  564|Homo sapiens bridging integrator-2
           protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -1

Query: 735 LSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEI 592
           LS  S+R+  +   V+TAT+S+P+    +   LS  + + SV AT+++
Sbjct: 251 LSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDL 298


>AF050079-1|AAC69519.1|  478|Homo sapiens growth arrest specific 11
           protein.
          Length = 478

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 463 QEDIDSILKYHQN-MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLS 287
           ++ +  +L  HQN + E  AE  V++ K  +++ +I  ++++ D  ALK   +L ++ L+
Sbjct: 99  KQKVKHLLYEHQNNLTEMKAEGTVVM-KLAQKEHRIQESVLRKDMRALK--VELKEQELA 155

Query: 286 S-LKVESERLQDTVEV 242
           S + V++ RL+ T E+
Sbjct: 156 SEVVVKNLRLKHTEEI 171


>AF050078-1|AAC69518.1|  478|Homo sapiens growth arrest specific 11
           protein.
          Length = 478

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -3

Query: 463 QEDIDSILKYHQN-MQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLS 287
           ++ +  +L  HQN + E  AE  V++ K  +++ +I  ++++ D  ALK   +L ++ L+
Sbjct: 99  KQKVKHLLYEHQNNLTEMKAEGTVVM-KLAQKEHRIQESVLRKDMRALK--VELKEQELA 155

Query: 286 S-LKVESERLQDTVEV 242
           S + V++ RL+ T E+
Sbjct: 156 SEVVVKNLRLKHTEEI 171


>AB032710-1|BAA88125.1|  565|Homo sapiens breast cancer associated
           protein BRAP1 protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -1

Query: 735 LSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEI 592
           LS  S+R+  +   V+TAT+S+P+    +   LS  + + SV AT+++
Sbjct: 252 LSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDL 299


>AB032698-1|BAA88108.1|  565|Homo sapiens breast cancer associated
           protein BRAP1 protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = -1

Query: 735 LSEYSKRAAFLKGVVQTATLSTPIEKLEAVQQLSHGAATMSVDATQEI 592
           LS  S+R+  +   V+TAT+S+P+    +   LS  + + SV AT+++
Sbjct: 252 LSSSSRRSLVISPPVRTATVSSPLTSPTSPSTLSLKSESESVSATEDL 299


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,637,191
Number of Sequences: 237096
Number of extensions: 1473817
Number of successful extensions: 3414
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3407
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -