Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00978
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical ... 37 0.013
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 30 1.5
AL032639-2|CAA21628.2| 269|Caenorhabditis elegans Hypothetical ... 30 1.5
U23511-10|AAC46789.3| 260|Caenorhabditis elegans Hypothetical p... 29 2.6
AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm rece... 29 2.6
AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical... 29 2.6
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm rec... 29 3.5
AF106575-5|AAC78171.1| 421|Caenorhabditis elegans Hypothetical ... 29 3.5
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.6
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.6
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.0
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 6.0
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 6.0
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 6.0
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.0
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 6.0
>AC006708-5|AAF60428.2| 254|Caenorhabditis elegans Hypothetical
protein Y110A7A.11 protein.
Length = 254
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = -3
Query: 508 RNIIKTPNFTSNTTSQEDIDSILKYHQN--MQEKVAENMVMLTKNLKEQSQIASTIIKAD 335
R+ ++ +SN +D ++ +N ++E++A ++ + ++ K A +IK D
Sbjct: 131 RSDLRKQLLSSNKHRAQDTSEDQEFMKNELVEEELANSLATMARSFKTMMSAAGDVIKED 190
Query: 334 TEALKKSSDLTDRNLSSLKVESERLQ 257
TE + D N ++L ++SER++
Sbjct: 191 TERAILMAKEVDDNKTALGIQSERVE 216
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -2
Query: 248 RSAWKCWLWIMLAVVMVIFINMVLFMKVMKK 156
+ + C+ +++ ++ + F++MVL MK+ KK
Sbjct: 221 KCGYDCFKVMLIVLIFMSFVSMVLMMKIFKK 251
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 302 RP*LVITESGIGEIAGHSRSAWKCWLWIMLAVVMVIFINMVL---FMKVMKKRK 150
+P V+ +G G+ AW W+W+++ +++++ + +L F MK+++
Sbjct: 181 QPPPVVNPGAVGTYTGYG-GAWPWWVWLLIILLLLLLLCCLLALCFAAFMKRKR 233
>AL032639-2|CAA21628.2| 269|Caenorhabditis elegans Hypothetical
protein Y38F1A.1 protein.
Length = 269
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = -3
Query: 463 QEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSDLTDRNLSS 284
Q+ I K HQ+ ++ E + ++K+L + I+K+ E LK+ SD+T+ ++S
Sbjct: 49 QQAISDYKKSHQHRTQRTKEKLTDMSKDL---TITGKNIVKSCEERLKQISDVTEPYINS 105
>U23511-10|AAC46789.3| 260|Caenorhabditis elegans Hypothetical
protein C32D5.1 protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 496 KTPNFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTK 383
KTPN T+N + E I+ Y N E V + +ML K
Sbjct: 204 KTPNSTANLPTSEKHADIIAYVTNFLEDVPNDKLMLHK 241
>AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm
receptor protein 258 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 227 LWIMLAVVMVIFINMVLFMKVMKKRKYEL*MLRYVNILLN 108
+++ +V+ IFIN VL + ++KK L +Y+ I +N
Sbjct: 7 IFLNSSVICAIFINTVLILLILKKSPASLGAYKYLMIYIN 46
>AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical
protein Y19D10A.2 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 227 LWIMLAVVMVIFINMVLFMKVMKKRKYEL*MLRYVNILLN 108
+++ +V+ IFIN VL + ++KK L +Y+ I +N
Sbjct: 7 IFLNSSVICAIFINTVLILLILKKSPASLGAYKYLMIYIN 46
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = -3
Query: 493 TPNFTSNTTSQEDIDSILKYH---QNMQEK-VAENMVMLTKNLKEQSQIASTIIKADTEA 326
TP T+ TT+ E+ + K ++M EK + E + ++ L++ ++ + +A TEA
Sbjct: 773 TPATTTVTTTTEETTTPKKQEVKMKHMDEKALMEKINEASEKLEKSQEVTEEVTEATTEA 832
Query: 325 LKKSSDLTDRNLSSLKVESERLQDTVEVPGNVGSG 221
+ + + T L + +D+ V G+G
Sbjct: 833 ITTTEESTTTAKLILNKKKNPTKDSGSVSSASGNG 867
>AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm
receptor protein 257 protein.
Length = 352
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 227 LWIMLAVVMVIFINMVLFMKVMKKRKYEL*MLRYVNILLN 108
+++ +V+ IFIN VL + ++KK L +Y+ + +N
Sbjct: 7 IFLNASVICAIFINFVLILLILKKSPASLGAYKYLMMYIN 46
>AF106575-5|AAC78171.1| 421|Caenorhabditis elegans Hypothetical
protein K04F1.12 protein.
Length = 421
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -3
Query: 487 NFTSNTTSQEDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSSD 308
N T N+TS +D D Y + + + ++ + ++K + ST+ D + +D
Sbjct: 57 NSTDNSTSTDDFD----YSRCPTGCIFDGSILYSDSIKNFPKKCSTVCAPDALYIGYETD 112
Query: 307 LTDRNLSS 284
LT++ L+S
Sbjct: 113 LTEKQLTS 120
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 138 LKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDKL 296
LK+V S+ H+ + H ++H H P P G+S S S + DD +
Sbjct: 356 LKYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDDI 410
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 138 LKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDKL 296
LK+V S+ H+ + H ++H H P P G+S S S + DD +
Sbjct: 356 LKYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDDI 410
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 114 QYIHVPKHLKFVFSFLHNLHKQDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
QY +VP + + H H+Q H ++H H P P G+S S S + DD
Sbjct: 332 QYKYVPSYA----TESHQKHEQ-HSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 386
Query: 294 L 296
+
Sbjct: 387 I 387
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 IHVPKHLKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
+ VP ++V S+ H+ + H ++H H P P G+S S S + DD
Sbjct: 512 VDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 571
Query: 294 L 296
+
Sbjct: 572 I 572
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 IHVPKHLKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
+ VP ++V S+ H+ + H ++H H P P G+S S S + DD
Sbjct: 371 VDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 430
Query: 294 L 296
+
Sbjct: 431 I 431
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 IHVPKHLKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
+ VP ++V S+ H+ + H ++H H P P G+S S S + DD
Sbjct: 235 VDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 294
Query: 294 L 296
+
Sbjct: 295 I 295
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 114 QYIHVPKHLKFVFSFLHNLHKQDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
QY +VP + + H H+Q H ++H H P P G+S S S + DD
Sbjct: 332 QYKYVPSYA----TESHQKHEQ-HSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 386
Query: 294 L 296
+
Sbjct: 387 I 387
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 IHVPKHLKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
+ VP ++V S+ H+ + H ++H H P P G+S S S + DD
Sbjct: 512 VDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 571
Query: 294 L 296
+
Sbjct: 572 I 572
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 120 IHVPKHLKFVFSFLHNLHK--QDHINKYNHDHS*HDPEPTFPGTSTVSCNLSDSTFSDDK 293
+ VP ++V S+ H+ + H ++H H P P G+S S S + DD
Sbjct: 371 VDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSGYDDDD 430
Query: 294 L 296
+
Sbjct: 431 I 431
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 269 GEIAGHSRSAWKCWLWI-MLAVVMVIFINMVLFMKVMKKRKYEL*MLRY 126
G H+RSA+ +W+ + A+VM I + VL + KRK + +++
Sbjct: 386 GTTGDHARSAFFVSIWLGLAAIVMSIATSSVLMAREKHKRKPSMKQMKH 434
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 269 GEIAGHSRSAWKCWLWI-MLAVVMVIFINMVLFMKVMKKRKYEL*MLRY 126
G H+RSA+ +W+ + A+VM I + VL + KRK + +++
Sbjct: 386 GTTGDHARSAFFVSIWLGLAAIVMSIATSSVLMAREKHKRKPSMKQMKH 434
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3
Query: 460 EDIDSILKYHQNMQEKVAENMVMLTKNLKEQSQIASTIIKADTEALKKSS 311
E++ ++ + Q + +AE L + K QS +TI+ T + KSS
Sbjct: 690 EEVRALEEQRQALMSNLAEKRRQLVDSKKSQSTANTTIVTTTTTEISKSS 739
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,934,813
Number of Sequences: 27780
Number of extensions: 263177
Number of successful extensions: 963
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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